KEGG   Malus domestica (apple): 103437582
Entry
103437582         CDS       T03194                                 
Name
(RefSeq) RNA pseudouridine synthase 7-like isoform X1
  KO
K15454  tRNA pseudouridine32 synthase [EC:5.4.99.28]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:mdm03016]
    103437582
Enzymes [BR:mdm01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.28  tRNA pseudouridine32 synthase
     103437582
Transfer RNA biogenesis [BR:mdm03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    103437582
SSDB
Motif
Pfam: PseudoU_synth_2 PPP1R21_C
Other DBs
NCBI-GeneID: 103437582
NCBI-ProteinID: XP_028959648
LinkDB
Position
06:complement(join(26906824..26906926,26914358..26914593,26914947..26915072,26915299..26915355,26915443..26915508,26916061..26916336,26916450..26916537,26916696..26916796,26916931..26917008,26917087..26917130,26917229..26917319))
AA seq 421 aa
MKSRKEEKAMEIVWQTPEIRPQRQDYIFRDGRRHVRPYNFEFICHVKKRWAGKTIVDLFT
YEFKGRPYDYYVSAVKSGRIQVEGVMVPVSYIVKTSQKISHFVHRHEPPVMTCDVSILQE
EPDVVVVCKPASVPVHSCGQYRKNTVVGILEAEHGLAPLFRNLSFKHYTFGSTYFSIMIF
CSEILYILYYTFLDMIMLAIHRLDRLVSGLLILAKSSSKANYFRQQIEGGMVQKQYIARV
AGEFPEQEQLVDANVIHDPRECRSTAEVSDLSDDTLIKGKTACTKFTRLSTNGIHSLVLC
EPVTGRTHQIRVHLQHVGYPIANDMLYLSKLVNGRSTEGMGADRAAVNSRPFLTSGFCEN
LSTEHVDPNEDFSIDPMCTNCPNLVPKGYDVHEEALWLHCVRYSAPGWTYECPYPDWASL
S
NT seq 1266 nt   +upstreamnt  +downstreamnt
atgaagagtagaaaggaagagaaggccatggagatcgtgtggcagactccggagattcgg
ccgcaacggcaagattacatctttcgcgatgggaggcgccatgtcagaccctacaacttc
gagttcatctgtcatgtgaagaaacggtgggcggggaagaccatcgttgacttgttcacc
tatgagttcaaaggccggccttatgattactatgttagtgcagtgaaatctggaaggata
caggttgagggagtgatggtgccggtttcctacattgttaaaacgtcgcaaaagataagc
cacttcgtccacaggcatgagccgccggtgatgacttgtgatgtatcaattctccaagaa
gaaccggatgtggttgtcgtttgtaaacctgcatctgttccggtgcattcatgtggtcaa
tatcgtaagaacactgttgttgggatccttgaggctgagcatggcttggcacctctattc
cgtaacctaagctttaaacattatacttttggcagcacgtattttagcataatgatattt
tgcagtgaaatcttatatattctttattatactttccttgacatgatcatgctagcgatt
catcgactagatcggcttgtctcaggactccttatcttggccaaaagttcttcaaaagcc
aactactttaggcaacagattgaaggagggatggtccagaaacagtacattgcaagagtt
gctggagaatttcctgagcaagagcaacttgtagatgctaacgttattcatgatcctcga
gaatgtaggagcacagcagaggttagtgatttatctgatgatacgctcatcaaggggaag
actgcctgtacaaagtttactagactcagtaccaatggaattcacagtcttgtcttgtgt
gaaccagtcactggccgaactcatcaaatacgtgtccatttgcaacatgtaggctatccg
atagccaatgacatgctttacctgtccaaacttgttaatggtcgttcaactgaaggaatg
ggtgctgatagagccgctgtaaattccaggccctttctgacctctgggttttgtgaaaat
ttatccactgaacatgtagaccccaatgaagatttcagcattgatcccatgtgtacaaat
tgtccgaatttggttccaaaaggatacgatgttcatgaagaggctttgtggctgcactgt
gttcgatattctgcacccggatggacttatgaatgcccgtatccggattgggcatcactc
agctaa

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