Malus domestica (apple): 103437641
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Entry
103437641 CDS
T03194
Name
(RefSeq) autophagy-related protein 16
KO
K17890
autophagy-related protein 16-1
Organism
mdm
Malus domestica (apple)
Pathway
mdm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103437641
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103437641
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103437641
Membrane trafficking [BR:
mdm04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
103437641
Others
Specific organelles associated proteins
Auto phagosome
103437641
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103437641
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
WDR55
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_EML
WDR90_beta-prop_4th
ANAPC4_WD40
Beta-prop_RIG_2nd
ATG16
WD40_MABP1-WDR62_1st
Beta-prop_SCAP
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_VPS8
Beta-prop_WDR35_TULP_N
Beta-prop_HPS5
Beta-prop_IFT122_1st
Beta-prop_NWD2_C
Beta-prop_SPT8
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_WDR19_1st
WD40_RFWD3
Beta-prop_Vps41
eIF2A
Cytochrom_D1
WDR54
Ge1_WD40
PQQ_2
Beta-prop_LRRK2
PEP5_VPS11_N
Beta-prop_RIG_1st
V-ATPase_H_C
Beta-prop_WDR75_2nd
DUF948
Fib_alpha
Motif
Other DBs
NCBI-GeneID:
103437641
NCBI-ProteinID:
XP_008374351
LinkDB
All DBs
Position
06:complement(join(29034150..29035172,29035650..29035845,29035937..29036118,29036414..29036540,29036666..29036667))
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AA seq
509 aa
AA seq
DB search
MSQEEIATEAIKHALKALRRRHLVEEGAHAPAIIALAKPILHQGSEWKEKAENLEMELQQ
CYKAQSRLSEQLVVEVAESRASKASLQEKEAAVADLQKELTEKRDECSQLAADLEEKIKA
LELVVNENKEIRAQLEAMSIRARNAETESKVLIDRWMLEKMKDAERLNEANALYEDMIER
LRASGLEKLARQQVDGVVRQSEEGAEYYVESTIPSACKNRIPAHEGGCASILFEYNSGRL
ITGGQDGSIKMWDTNNGSLTHTLHGCIGSVLDLTITHDNKSIIAASSSNKLYAWDVSSGR
VRHTLTGHMDKVCAVDVSKFSSRHVVSAAYDRTIKVWDLQKGYCTNTIMYPKNCNALSFS
MDGQTICSGHVDGNLRLWDIEKGKLLSEVAAHSNAVTSISLSRDGNVILTSGRDNVHNLF
DMRSLEVRRTLRATGNRVASNWSRSCISPDDNYVAAGSADGCVYIWSISKADIVSTLKEH
TASVLCCSWSGHGKPLASADKNGIICTWT
NT seq
1530 nt
NT seq
+upstream
nt +downstream
nt
atgtcgcaggaggagattgcgacggaagcgataaagcacgctctgaaggctctgcggagg
cggcatttggtggaagaaggtgctcatgctccagctatcatcgctcttgcgaagccaatt
cttcatcagggctcagaatggaaggagaaagcggagaatctggaaatggaactgcagcag
tgttacaaagctcaatcgcggttgtccgagcaactcgtggtggaagtagcagagtccaga
gcttcaaaagcttcacttcaagagaaagaagcggcagtggctgatcttcagaaggagtta
actgaaaaaagggatgaatgctctcagttagcggctgacttggaagagaagattaaagct
ttagaattggttgtgaatgagaacaaggaaataagagcacagctagaagcaatgtctatt
agagctaggaatgctgaaactgaaagtaaggtgttaattgaccgctggatgttggaaaag
atgaaggatgcagaacgccttaacgaggcaaatgcactatatgaagatatgatcgagcgg
cttagggccagcggtttggaaaaacttgctaggcagcaggtagatggtgttgtccgccaa
agtgaagaaggtgctgagtactatgtggagtcaaccattccctctgcatgcaagaatagg
atccctgcccatgaaggaggttgtgcatccatattatttgagtacaattctggcagattg
attactggtggacaggatgggtccattaaaatgtgggatacaaataatgggtcactaact
catacacttcacggttgcattggttctgttctggacctgacgattacccatgacaataaa
tctatcattgcagcaagcagctcaaacaaattgtatgcctgggatgttagctcagggagg
gttcgccacactctcactggccacatggataaagtttgtgcagtagatgtcagcaaattc
tcaagtcgtcatgttgtgagtgcagcttatgatcgtaccataaaagtttgggatttgcag
aaaggttactgcaccaatacaatcatgtacccgaaaaattgcaatgctttgtcattcagc
atggatggacagaccatatgttcaggccatgttgatggaaatcttcgtttgtgggatatt
gagaaaggaaagctactcagtgaagtagctgcacattcaaatgctgtgacatctatatct
ttgtcccgagatggtaatgttatactgaccagtgggagagacaatgtgcataatttgttt
gatatgcggtctctggaagtccgccgtacattaagagccactggaaacagagtagcgtcg
aattggagccggtcctgtatcagtccagatgacaattacgttgctgctggatctgctgac
ggttgtgtgtatatttggtcaatatcgaaagctgacattgtgagcactctgaaggagcac
actgcatctgtcctgtgttgttcatggagcgggcatggaaaacctctagcttctgcggac
aagaacggaatcatctgtacttggacgtga
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integrated database retrieval system
