Malus domestica (apple): 103437645
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Entry
103437645 CDS
T03194
Name
(RefSeq) probable pectate lyase 18 precursor
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103437645
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103437645
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GFIT
Motif
Pfam:
Pectate_lyase_4
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103437645
NCBI-ProteinID:
NP_001280839
UniProt:
Q6U7H9
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Position
06:complement(join(29066454..29066675,29066782..29066920,29067226..29067972,29068224..29068372))
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AA seq
418 aa
AA seq
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MPKMPRPSSGPSLLSPLLLLPLLSLLSPTLISSRPLHLQDPELVVQEVQRNISDSVSRRN
LGYLSCGTGNPIDDCWRCDPNWEKNRQSLADCAIGFGKNAIGGRDGKIYVVTDSGDDDPV
NPKPGTLRHAVIQDEPLWIIFQRDMTIQLKEELIMNSFKTIDGRGASVHIAGGPCITIQF
VTNIIIHGLHIHDCKQGGNAMVRSSPRHFGWRTVSDGDGVSIFGGSHVWVDHCSLSNCKD
GLVDAIYGSTAITISNNYMTHHDKVMLLGHSDSYTNDKNMQITIAFNHFGEGLVQRMPRC
RHGYFHVVNNDYTHWEMYAIGGSADPTINSQGNRFAAPDIRSSKEVTKHEDAPESEWKNW
NWRSEGDLMLNGAFFTASGAGASSSYARASSLGAKPSSLVGAITTASGALSCRKGSRC
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaatgccaaggccctcctcaggcccctcacttctctctcccctcctcctcctc
cctctcctctctctcctctccccaaccctcatttcctccaggccacttcatctccaagac
cctgaattggtagtacaagaggtacaaaggaatattagcgactcagtatctaggaggaac
ttgggctacttgtcatgcgggaccggcaaccctatcgacgactgctggcggtgcgacccg
aactgggagaagaacaggcagagcttagctgattgtgcgatagggttcggaaagaacgcc
ataggtggaagagacgggaagatttacgtggtcacagattccggcgatgacgaccccgtg
aaccccaagccaggaaccctacgacacgccgtcatccaagacgagccattatggatcatt
ttccagcgtgacatgaccatccagctgaaggaggagctgatcatgaactccttcaagaca
atcgacggccggggagcgtccgtacacattgccggcgggccatgcatcaccatccagttc
gtgaccaacattattatccacggactgcacatacacgattgcaagcagggtgggaacgct
atggtgaggagctcccccaggcacttcgggtggaggaccgtatcggacggcgacggcgtg
tcgatcttcggtgggagccacgtgtgggtggaccattgctcgttgtccaactgcaaagat
gggttggttgatgcaatttatgggtccactgcgataacgatttcgaacaattacatgacg
caccatgataaggtgatgcttttggggcatagcgattcgtataccaacgacaagaacatg
caaatcaccattgcgttcaatcactttggagaaggcttggtccaaagaatgccaagatgt
aggcatggatatttccatgtggtgaacaatgactacacccattgggagatgtatgccatt
ggtgggagtgcagaccctacaatcaatagccaagggaacagatttgctgcaccagatatc
agatccagcaaagaggtgaccaaacatgaggatgcaccagaaagtgaatggaagaattgg
aactggaggtcggaaggcgacttgatgctcaacggtgcgttttttactgcatcaggtgcc
ggagcttcctctagctacgccagggcttcgagcttgggtgcaaagccatcttctctagtg
ggtgcgattaccacggcttccggcgcacttagttgccgaaagggctctcgttgctga
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