Malus domestica (apple): 103437798
Help
Entry
103437798 CDS
T03194
Name
(RefSeq) pectate lyase-like
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103437798
Enzymes [BR:
mdm01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
103437798
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pec_lyase_N
Beta_helix
DUF4834
Motif
Other DBs
NCBI-GeneID:
103437798
NCBI-ProteinID:
XP_008374522
LinkDB
All DBs
Position
06:join(31356435..31356643,31356783..31357437,31357534..31357776,31357858..31358076)
Genome browser
AA seq
441 aa
AA seq
DB search
MAMEAAYKLFVFILCIFIVAITIPATVTANIAVFDEHWQGRAKEAKQAANKAYNKNPAEV
TGSFNKEVHNTFDSMNNTRRNLKEKYKGPCVATNPIDRCWRCDPNWETNRKKLADCAKGF
GHKTTGGKAGEIYVVTDNSDNDLVNPKPGTLRHAVIQTGPLWIIFAHDMKIKLSEELMVT
SDKTIDARGANVHIQDGGQITLQFVKNVIIHNLHIHDNKAGNGGMIRDSVNHYGQRTRSD
GDGISMYGASNVWIDHVSASNCEDGLIDAIQGSTAITISNCHFTNHNDVMLFGSSDSNSQ
DEVMQITIAFNHFGQGLTQRMPRCRWGFFHVVNNDYTHWLMYAIGGSQHPTIISQGNRFI
APLNEASKEVTKREYAAENVWKSWNWRSENDLMVNGAFFVESGSPIRNLPEADMIQAKPG
TFVAKLTRFAGPLKCIKGKPC
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atggcaatggaagctgcttacaagctgtttgtgtttattttatgtatttttattgttgca
ataacaattccggcaacggtgacggccaacattgcggttttcgacgagcactggcaaggt
cgagctaaagaggcgaagcaggccgccaacaaagcctacaataaaaatcctgcagaagtc
actggaagtttcaataaggaagtccacaacaccttcgatagcatgaacaatacgcgaagg
aacttaaaagagaagtacaagggtccatgcgtggctacaaaccctattgatcgttgctgg
agatgtgatccaaactgggaaacaaatcgcaagaagctggctgattgcgccaaaggattt
gggcacaagacgacaggaggcaaggctggagagatatatgtggtgacagataactccgac
aatgacctggtgaacccgaaaccagggacactacgccacgctgtgattcaaactgggcca
ctctggatcatattcgctcacgacatgaagataaagctaagcgaagagcttatggtgacg
agtgacaagacgattgatgcacgaggtgctaatgtgcacattcaagacggtggccaaatt
acattacagtttgtgaagaatgtgatcatccataacctccacattcacgataacaaggca
ggaaatggtggcatgattagggactcggtgaatcactatggacaacgcacacgtagtgat
ggtgatggtatatcaatgtatggagcctcaaacgtttggatagaccatgtctctgcgtca
aattgcgaggatggactcattgatgccatccaggggtctacagccatcaccatatccaat
tgtcacttcaccaatcataatgatgtgatgttatttggttcaagtgatagcaactctcag
gatgaagtgatgcagataactattgctttcaaccatttcggtcaggggttaactcagcgt
atgccaaggtgccggtgggggtttttccacgttgtaaacaacgactacacacattggctt
atgtacgctattggtggcagccaacatcctaccataattagccagggcaaccgcttcatt
gctccgttaaatgaagcaagtaaagaggtgactaagagggaatatgcagcagagaacgtg
tggaaatcgtggaattggagatcggagaacgatcttatggtgaatggagcattctttgtt
gaatctggtagcccaatcaggaatctcccagaggcggatatgatccaggcaaagcctggg
acattcgtggcgaaactcacacgctttgcaggtcctcttaaatgcattaaagggaagcca
tgctag
DBGET
integrated database retrieval system
