KEGG   Malus domestica (apple): 103437966
Entry
103437966         CDS       T03194                                 
Name
(RefSeq) DNA mismatch repair protein MSH2
  KO
K08735  DNA mismatch repair protein MSH2
Organism
mdm  Malus domestica (apple)
Pathway
mdm03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    103437966
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103437966
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     103437966
SSDB
Motif
Pfam: MutS_V MutS_III MutS_IV MutS_I MutS_II
Other DBs
NCBI-GeneID: 103437966
NCBI-ProteinID: XP_008374721
LinkDB
Position
06:join(33132117..33132165,33132318..33132367,33132564..33132596,33132734..33133807,33133963..33134517,33134589..33134699,33134817..33134906,33135013..33135084,33135268..33135378,33135527..33135653,33135803..33136005,33136219..33136371,33136678..33136878)
AA seq 942 aa
MDANFEDHSKLPELKLDAKQSQGFLSFFKTLPNDSRAIRLFDRRDYYTAHGENATFIAKT
YYRTTTALRQLGSGSNGLSSVSVSKNMFETITRDILLERTDHTLEIYEGSGSSWKLVKSG
TPGNLGSFEDVLFANNEMQDTPVVVALLPNFRENGCTVGLGYVDLTKRVLGLAEFIDDSH
FTNVESALVALGCKECLLPLESGKTSEIRTLHDALSRCGVMLTERKKTEFKMRDLVQDLG
RLVKGSIEPVRDFVSGFEFAPGALGALLSYAELLADESNYGNYSIQRYNLDSYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGKRLLHMWLKQPLLDVNEINSRLDLVQAF
VEDPALRQDLRQHLKRISDIERLMHNLEKKRAGLQHIVKLYQSCIRLPYIKSALERYDGQ
FSSLTKERYWEPLELWTDDRHLNKFIALVEAAVDLDQLENGEYMISSGYDPALSALNEEQ
ESLEHQIQNLHKQTANDLDLALDKALKLDKGTQFGHVFRITKKEEPKIRKKLTTQFIVLE
TRKDGVKFTNTKLKKLGDQYQRIVEEYKSCQKELVNRVIQTTTTFSEVFWSVAGLLSELD
VLLSFADLASSCPTPYTRPVITPPDEGDIILEGSRHPCVEAQDWVNFIPNDCKLVRGKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDSASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEHLVEVIKAPTLFATH
FHELTALAHENVVEDTNMKQIVGVANYHVSAHIDSSSRKLTMLYKVEPGACDQSFGIQVA
EFANFPESVVSLAREKAAELEDFSATTVTPNDATEEVGLKRKREHDTGDTTKGAARAHKF
LEEFSNLPLETMDLKQALQRVCKMKDELQKDAANSQWLQQFF
NT seq 2829 nt   +upstreamnt  +downstreamnt
atggatgccaattttgaggaccacagcaagcttcccgagctcaagctagatgcaaagcag
tctcaagggtttctctcattcttcaaaaccctccccaatgattcaagagctattcgattg
tttgatcgtcgggactactatactgctcatggtgaaaatgccactttcatcgcaaagacc
tactaccgtaccaccactgctttacggcagttgggtagcggatctaatggcctatccagt
gtgagtgttagtaaaaatatgtttgagacaattacgcgtgatatactactggaaagaaca
gaccatactcttgagatttacgagggtagtggctcaagttggaagctggtgaaaagtgga
acgcctggaaaccttggcagtttcgaagatgttttgtttgccaacaatgagatgcaggat
accccagtggttgttgcgctattacctaactttcgggaaaatggttgcacagttgggtta
ggatatgttgatctaactaaacgagtacttggattagctgaatttattgatgatagtcac
tttacaaatgtggaatcagctttagttgcacttggttgcaaggaatgccttctgccttta
gagagtggcaaaactagcgaaattagaacattgcatgatgcattgagtagatgtggtgtg
atgttaaccgagaggaagaagactgaatttaagatgagggatttggttcaggatctcggt
cggcttgtcaaaggctccattgaaccagttcgagattttgtgtcagggtttgagtttgca
cctggtgcattgggggcattgctctcttatgcagaattacttgctgacgagagcaattat
ggaaattatagcattcaaagatataatcttgatagctatatgaggttagattctgctgct
atgagggcacttaatgtcctggaaagcaaaactgatgcaaacaaaaatttcagtttgttt
ggtcttatgaataggacttgtactgctggaatgggtaaaagattactgcacatgtggcta
aaacagcctttattggatgtaaatgaaatcaactcgaggctagatttggtacaagcattt
gtggaggatcctgcacttcgccaagatttgaggcagcatctgaaaagaatttcagacatc
gagcggctgatgcacaatcttgagaagaaaagagctggtttgcagcatattgtgaaactt
tatcagtcgtgtataagacttccctacattaagagtgccctagaacgctatgatggacag
ttctcctcactgaccaaggaaaggtattgggaaccccttgagttatggactgatgatcgc
cacttaaataagttcattgctctggtggaagctgctgttgaccttgatcaacttgagaat
ggagagtacatgatatcatctggttatgacccagcactgtctgcactgaacgaagagcaa
gagtcgttggagcaccaaatacagaatttgcacaaacaaactgccaatgatctcgatctc
gccttagataaggctttaaaattagataaaggtacacaatttggacatgttttcagaatc
acaaagaaggaagagccaaaaatacggaagaagctcaccacacaattcattgtcctggaa
actcgaaaggatggagtgaaatttaccaacacaaagcttaaaaagttaggggatcagtat
caaagaatagttgaagagtataagagttgtcagaaagagcttgttaaccgagttattcaa
actacaacaactttctctgaggtgttctggtctgtagctgggttgctctctgaattggat
gtcttacttagttttgctgatttggcctctagttgtcctactccttacactaggccagtc
atcacgccaccggatgaaggggatattatattagaaggcagtagacatccctgtgtggag
gctcaggactgggtgaattttatacccaacgattgtaaacttgtgagaggaaagagttgg
ttccaaatcatcacaggacccaatatgggtggtaaatcaacatttatccgacaggttggt
gtgaatattctgatggcacaagttggttgtttcgttccttgtgactcagctagcatttct
gttcgtgattgcatttttgctcgggtgggagctggcgactgccaactacgtggagtttct
acctttatgcaagaaatgcttgagactgcatctatactgaaaggagctacagacaagtca
ctaataattattgacgagttaggccgagggacttcaacttatgatggattcggtttagct
tgggccatttgtgagcaccttgttgaagtgattaaagcacctaccttatttgcaacccac
tttcatgaattaactgctttagctcatgaaaatgtcgttgaggacactaatatgaagcaa
attgttggcgtagcaaactatcatgttagtgcacatattgactcatcaagccgcaagttg
actatgctgtacaaggttgagccaggggcttgtgatcaaagtttcggtattcaagttgca
gagtttgcaaactttcctgaaagtgttgtttcccttgctcgagaaaaagctgctgaactg
gaggatttctctgctactacagtcacgccaaatgatgctacagaagaggttggtttgaag
cgtaagagagagcacgacactggtgatacgactaaaggagctgctcgggcgcacaagttt
ctggaggagttttctaatctgccattggagacgatggatttaaagcaggctctgcaaaga
gtttgcaagatgaaggatgagttgcaaaaggatgcagctaattcccaatggctccagcag
tttttctag

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