KEGG   Malus domestica (apple): 103437989
Entry
103437989         CDS       T03194                                 
Name
(RefSeq) serine/threonine-protein phosphatase 2A 65 kDa regulatory subunit A beta isoform-like
  KO
K03456  serine/threonine-protein phosphatase 2A regulatory subunit A
Organism
mdm  Malus domestica (apple)
Pathway
mdm03015  mRNA surveillance pathway
mdm04382  Cornified envelope formation
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103437989
 09150 Organismal Systems
  09158 Development and regeneration
   04382 Cornified envelope formation
    103437989
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:mdm01009]
    103437989
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103437989
   03036 Chromosome and associated proteins [BR:mdm03036]
    103437989
Protein phosphatases and associated proteins [BR:mdm01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-2 (PP2A)
    Regulatory subunits
     103437989
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Protein phosphatase 2A
     103437989
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Centromeric chromatin formation proteins
   Other centromeric chromatin formation proteins
    PP2A (protein phosphatase 2A)
     103437989
SSDB
Motif
Pfam: HEAT PPP2R1A-like_HEAT HEAT_2 HEAT_EZ Vac14_Fab1_bd HEAT_EF3_N Htt_N-HEAT_1 PDS5 CLASP_N RTP1_C1 Adaptin_N Cnd1 TAF6_C CEP104-like_TOG TPR_TNPO3_IPO13_3rd
Other DBs
NCBI-GeneID: 103437989
NCBI-ProteinID: XP_008374745
LinkDB
Position
06:complement(join(33420448..33420567,33420688..33420754,33420838..33420977,33421169..33421261,33421432..33421614,33422092..33422196,33422296..33422376,33422512..33422653,33422820..33422899,33423038..33423150,33423288..33423534,33423852..33424244))
AA seq 587 aa
MAMVDETLYPIAVLIDELKNEDIKLRLNSIRRISTIARALGEERTRKELIPFLSENNDDD
DEVLLAMAEELGVFIPYVGGVDHANVLLPPLETLCTVEETCVRDKAVDSLCKIGGQMREK
DLVEYFIPLVKRLAAGEWFTARVSSCGLFHIAYPSAPETLKTELRTTYSQLCQDDMPMVR
RSAATNLGKFAGTVEDVHLKADIMSIFEDLTQDDQDSVRLLAVEGCAALGKLLEPQECVA
HILPVIVNFSQDKSWRVRYMVANQLYELCEAVGPEATRSDLVPAYVRLLRDNEAEVRIAA
AGKVTKFCRILNPELAIQQILPFVKDLSTDSSQHVRSALASVIMGMAPVLGKDATIEQLL
PIFLSLLKDEFPDVRLNIISKLDQVNQVIGIDLLSQSLLPAIVELAEDRHWRVRLAIIEY
IPLLASQLGVGFFDDKLGSLCMQWLNDKVYSIRDAAANNVKRLAEEFGPEWAMQHIVPQV
LEMISNPHYLYRMTILHAISLLAPVLGSEITCSKLLPVVVTASKDRVPNIKFNVAKVLQS
IIPIVDQSVVEKTIRPCLVELSEDPDVDVRSFASQALQSSEQVMMTS
NT seq 1764 nt   +upstreamnt  +downstreamnt
atggctatggttgatgaaaccttgtacccgatcgcggttttaatcgatgagctgaagaac
gaagacattaagctccgtttgaactcaatccggaggatttccacgattgcccgtgcactc
ggggaagagaggaccaggaaggaactgattcctttcctcagcgagaacaacgatgacgat
gatgaagtgctgctggcaatggcggaagagttgggggtgtttatcccctatgtgggtggt
gtggatcatgccaacgttctgctcccgcctttggaaacgctctgcacagttgaggaaaca
tgtgtgagggacaaggcggtggattcgttgtgtaaaattggcgggcagatgagagaaaag
gacttggttgaatatttcattcctttggttaagagacttgctgccggagaatggtttaca
gcccgagtttcatcctgcggtttgtttcatattgcttatcctagtgccccagaaacttta
aaaacggaactacggacgacatacagtcaactgtgccaagatgacatgcccatggttagg
agatctgctgcaactaacctgggaaaatttgctgggactgtagaagacgtgcacctcaag
gctgacataatgtctatatttgaggatttgacacaggatgatcaggattctgttcggtta
ttggctgttgagggttgtgcagctcttgggaagttgttggaacctcaagaatgtgtggcc
catattcttcctgtcattgttaacttttcacaggataagtcttggcgtgttcggtacatg
gttgcgaatcaattatatgagctgtgtgaagctgttggtccagaagctacaaggtcggac
ctggtgcctgcatatgttcggcttcttcgggataatgaggctgaagtacgaatagctgct
gcaggaaaagtaactaagttttgccgaattttgaatccagaacttgccattcagcagatc
cttccttttgtaaaggacttgtcaacagattcttcccagcacgttcgttctgcattggca
tcagtaataatgggaatggcaccagttttaggaaaggatgcaaccatagagcagctgctg
cctatttttctctctcttctaaaagacgagttccctgatgtgcgattgaatattatcagc
aagcttgatcaagtcaaccaggtaattgggattgatctgctgtcccagtctttgttgccg
gcaattgttgaacttgcagaggatagacattggagggttcggcttgcgataatagaatat
attcctttattggcaagtcagttgggtgttgggttttttgatgataagcttgggtctctt
tgcatgcagtggttaaatgataaggtttactcaatacgtgatgcagctgctaataatgtg
aagcgccttgcggaagaatttggccctgaatgggcaatgcagcatatagtcccacaggtt
ttggaaatgattagcaacccccactatttgtatcggatgacgattctccatgcaatttcc
ctacttgcccctgttttgggatcagaaatcacttgttccaagcttctaccggtggtagtc
actgcatcaaaagatagggtaccaaacatcaagttcaatgtggctaaggtgttgcagtca
attattccgatagttgatcagtcggtggtggagaaaactattcgtccttgtttggttgag
cttagcgaggatcctgacgttgatgtaaggtcctttgctagccaagcccttcagtcaagt
gagcaggtcatgatgactagctag

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