Malus domestica (apple): 103437990
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Entry
103437990 CDS
T03194
Name
(RefSeq) coatomer subunit alpha-1-like
KO
K05236
coatomer subunit alpha
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103437990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mdm04147
]
103437990
Membrane trafficking [BR:
mdm04131
]
Endoplasmic reticulum (ER) - Golgi transport
Retrieval pathways
Coat protein complex I (COP-I)
103437990
Exosome [BR:
mdm04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103437990
Exosomal proteins of bladder cancer cells
103437990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
COPI_C
B-prop_COPA_B_2nd
WD40
WD40_Prp19
WD40_WDHD1_1st
WDR55
WD40_CDC20-Fz
Beta-prop_EML_2
EIF3I
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
TPR_COPA_B
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_MABP1-WDR62_2nd
Beta-prop_SCAP
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_DCAF4
WD40_RFWD3
NBCH_WD40
Beta-prop_SPT8
Beta-prop_IFT140_1st
Beta-prop_RIG_2nd
Beta-prop_WDR19_1st
BPS1
Zn_ribbon_19
Aa-Ago_N
Motif
Other DBs
NCBI-GeneID:
103437990
NCBI-ProteinID:
XP_008374746
UniProt:
A0A498JNT1
LinkDB
All DBs
Position
06:complement(join(33413872..33416819,33417070..33417564,33417905..33418112))
Genome browser
AA seq
1216 aa
AA seq
DB search
MLTKFETKSNRVKGLSFHPKRPWILASLHSGVVQLWDYRMGTLIDRFDEHDGPVRGVHFH
KSQPLFVSGGDDYKIKVWNYKMHRCLFTLLGHLDYIRTVQFHHEYPWIVSASDDQTIRIW
NWQSRTCISVLTGHNHYVMCASFHPKEDLVVSASLDQTVRVWDIGSLKKKTVSPADDILR
LSQMNTDLFGGVDTVVKYVLEGHDRGVNWASFHPNLPLIVSGADDRQVKLWRMNDTKAWE
VDTLRGHMNNVSCVMFHAKQDIIVSNSEDKSIRVWDVTKRTGIQTFRREHDRFWILSSHP
EMNLLAAGHDSGMIVFKLERERPAFAVSGSSLFYVKDRFLRYYEFSTQRDTQVIPIRRPG
STTLNQSPRTLSYSPTENAVLISSDLDGGSYELYLIPKDSISRGDSLQDAKRGVGGSAVF
IARNRFAVLDKINNQVLIKNMANEAGKKIPLPFAADAIFYAGSNNLLCRVEDKVVIFDLQ
QKIILGELQTPFIKYVVWSNDMESVALLSKHAIIIANKKLVHQCTLHETIRVKSGGWDDN
GVFIYTTLNHIKYCLPNGDSGIIRTLDVPIYITKVSGNTIFCLDRDGKNRAIVIDATEYI
FKLSLLKKRYDHVMSMIRNSQLCGQAMIAYLQQKGFPEVALHFVKDERTRFNLALESGNI
QIAVASATAIDEKDYWYRLGVEALRQGNAGIVEYAYQKTKNFERLSFLYLITGNMEKLSK
MLKIAEVKNDVMGQFHNALYLGNVKERIKILENVGHLPLAYITASVHGLHDVAERLSAEL
GENVPTLPQGKVPTLLMPPTPIVCGGDWPLLRVMRGIFEGGLDNVGRGAADEEDEAVDGD
WGEELDMVDVDGLQNGDGTAGLEDEETGEGHEEEEGWDLEDLELPPEADTPRASVNASSF
VAPTTGMPVSQIWTQRSSLAAEHAAAGNFDTAMRLLKRQLGFKNFALLKPMFLDLHTGSH
SYLPAFSSAPVISLAVERGWNVSATPNVRGPPALVFNFSQLEEKLKAGYKATTNGKLADA
LKIFLSILHTIPLIVVDSRREVDEVKELIIIVKEYVLGLQIELKRREMKDDPKREQELAA
YFTHCNLQTPHLRLALNSALTVCYKAGNIATAANFARRLLETNPTNESLAKKARQVLQAA
ERNMTDKSQLNYDFRNPFVICGATYVPIYRGQKDVSCPYCSSRFVATQEGQLCTVCDLAV
VGADASGLLCSPSQVR
NT seq
3651 nt
NT seq
+upstream
nt +downstream
nt
atgttgaccaagtttgaaacgaagagtaacagagtgaagggactgagcttccaccctaag
aggccgtggatcctcgcgagtcttcacagtggtgtggtccagctatgggactaccgcatg
gggacgctcattgatcgattcgacgagcacgatgggcctgttcgcggcgtccactttcac
aaatctcagcccctctttgtctctggaggggatgattataagattaaagtttggaactat
aagatgcataggtgtctttttactcttctcgggcaccttgattatatccgtaccgtgcag
tttcaccacgaatacccgtggattgtgagtgccagtgatgaccagaccattcgtatatgg
aattggcagtcacgtacttgtatttcagtgttgacagggcacaatcattatgtcatgtgt
gcctcattccatcctaaagaagaccttgttgtatctgcctctctagatcagactgtccga
gtttgggatattggttccctgaaaaagaagaccgtatcaccggcagatgacattctgcga
ctaagtcagatgaacacagatctttttggcggtgttgatactgttgttaagtatgtcttg
gaagggcatgatcgtggtgtcaattgggcctcattccaccccaacctgcctctgattgtc
tcaggagcagatgatcgccaagttaaattgtggcgaatgaatgatacaaaggcttgggaa
gtggatacattgagagggcacatgaataatgtttcatgtgtcatgtttcatgccaaacag
gacataattgtatctaactcggaggacaaaagtatacgtgtctgggatgtaacgaagcgg
actggaattcaaactttccgaagagagcatgaccgtttttggattctttcatctcaccct
gaaatgaatctgttggcagctggtcatgacagtggcatgattgtatttaagctagagagg
gaacgaccagcctttgcagtgagtggtagttctctgttctacgttaaagatcgctttttg
cggtactatgagttttcaacccaaagagacacacaagttattccaattcgacgccctggt
tccaccactttaaatcaaagtccaaggactctttcttacagtcctacagaaaatgcagtt
cttatttcctcagacttggatgggggatcttatgaattgtatttgatacccaaagacagc
attagtaggggtgatagtctgcaagatgcaaagagaggtgttggaggttcagctgtgttt
attgcacggaataggttcgctgtgcttgacaaaatcaacaaccaagtcttgattaagaat
atggcgaatgaggctggtaaaaagatcccccttccttttgctgctgacgcaatattctat
gctggatcaaataatttgctgtgtagagtagaagacaaagtggttatatttgatctccag
cagaagattatacttggtgaacttcaaacccccttcatcaagtatgttgtttggtccaat
gacatggaaagtgttgccttgctcagcaaacatgccattatcattgccaacaaaaagctt
gtgcatcagtgcactcttcatgagacaatccgtgtgaagagtggtggatgggatgacaat
ggtgttttcatttatacgactctaaatcacataaaatattgccttcctaatggagacagt
ggaataatcagaaccctagatgttcctatttacattacgaaggtttctggaaatactatc
ttctgcttggatagggatgggaaaaacagggccatagttattgatgctacggaatacatt
ttcaagttatctctattgaagaagagatatgaccatgtaatgagcatgataaggaactca
cagctatgtgggcaggcaatgattgcttatctgcaacagaaggggtttcctgaagttgca
ctccattttgtgaaagatgaaagaaccagattcaacctggctctggagagtgggaatatt
caaattgcagttgcatccgctacagcaatcgatgaaaaagactactggtataggttgggg
gtggaggctcttcgccaaggcaatgcgggtattgtggagtatgcctaccagaagactaaa
aattttgagaggctatctttcctttatctaattaccggtaatatggaaaaactgtccaag
atgctgaaaattgctgaggttaagaatgatgtcatgggtcagttccacaatgcactgtat
ctaggcaatgtcaaggagcgtattaagatcttggagaatgttggccacttgccacttgct
tacatcacagcttcagttcacggcctgcacgatgttgctgaaaggctatctgcagagttg
ggagaaaatgttccgacattgccgcaggggaaagtgcccactcttttaatgccccctacc
ccaattgtgtgtggcggtgattggcctcttcttagagtcatgagaggtatttttgaaggt
ggattggataatgttggcaggggagctgcggatgaagaggatgaggctgttgatggtgat
tggggtgaggagctggacatggttgacgttgatggcttgcaaaatggagatggcaccgca
ggattagaagatgaggaaacaggtgaaggacatgaggaagaggaaggatgggaccttgaa
gatttggagcttccccctgaagctgacacaccaagggcttctgtaaatgctagttcgttt
gttgctccaactactggcatgcctgtaagccagatttggacccagaggtcatctcttgcc
gctgaacatgcagcagctggcaattttgacactgctatgcgtttactgaaaaggcaactt
ggattcaaaaactttgctcttttaaaaccaatgtttcttgatcttcacactggcagccac
agctatcttcctgcattttcatctgcaccggtgatatctctagcggttgagcgggggtgg
aatgtatctgctaccccaaatgtgagaggtccaccagcactcgtgttcaatttttcccag
ttggaagagaaactgaaagctggttacaaggctaccacaaatgggaagctcgccgacgct
ctgaagatctttctgagcattcttcacacaattcctctgattgttgttgattctaggagg
gaagtcgatgaagtcaaggagttaattataatagtcaaagagtatgttctgggattacaa
atcgagctgaagagaagggaaatgaaagatgatccaaaacgggagcaggagcttgcagct
tatttcacgcactgcaatcttcaaacacctcacttacggcttgccttgaatagtgcactg
actgtttgctataaggccgggaacattgctactgcagctaactttgccaggcggctgttg
gaaacaaaccccaccaatgagagtctagcaaagaaagcccggcaagtgctgcaggctgca
gaaaggaatatgactgataaatctcaactgaactatgatttcagaaacccatttgtgatt
tgtggggcaacatatgtaccaatttaccgaggacagaaggatgtctcttgcccatattgt
agctcacggtttgtggcaactcaagaagggcagctctgtactgtttgtgatcttgcagtg
gttggggcagatgcttctgggttgctatgttctccttctcaggttcgataa
DBGET
integrated database retrieval system
