Malus domestica (apple): 103438044
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Entry
103438044 CDS
T03194
Name
(RefSeq) cyclin-dependent kinase D-3
KO
K02202
cyclin-dependent kinase 7 [EC:
2.7.11.22
2.7.11.23
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
mdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103438044
09124 Replication and repair
03420 Nucleotide excision repair
103438044
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
mdm01001
]
103438044
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103438044
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103438044
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103438044
Enzymes [BR:
mdm01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.22 cyclin-dependent kinase
103438044
2.7.11.23 [RNA-polymerase]-subunit kinase
103438044
Protein kinases [BR:
mdm01001
]
Serine/threonine kinases: CMGC group
CDK family
103438044
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
103438044
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Capping factors
103438044
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
103438044
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pkinase
PK_Tyr_Ser-Thr
ABC1
Haspin_kinase
Seadorna_VP7
Motif
Other DBs
NCBI-GeneID:
103438044
NCBI-ProteinID:
XP_008374801
UniProt:
A0A498JRU3
LinkDB
All DBs
Position
06:complement(join(34063125..34063182,34063460..34063765,34063853..34064088,34064574..34064699,34065224..34065332,34065423..34065721,34066300..34066404))
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AA seq
412 aa
AA seq
DB search
MAEVDLTKKVADRYLKREVLGEGTYGVVYKAIDTKTGQTVAIKKIRLGKQKEGVNFTALR
EIKLLKELKDPNIIELIEAFPHKGNLHLVFEFMETDLEAVIRDRNIFLSPADIKSYLQMT
LKGLAVCHKKWVLHRDMKPNNLLIGPNGQLKLADFGLARIFGSPDRRFTHQVFARWYRAP
ELLFGTKQYGPGVDVWAAACIFAELLLRRPFLQGSSDIDQLGKIFAAFGTPTPSQWPDMV
YLRDYVEYQYVPAPPLRSLFPVAGDDALDLLAKMFTYDPKVRISVQQALEHRYFTSAPLP
TYPDKLPRPAPKRESKASDFDPNDGPTVLSPPRKSRRVMPKRDGFEGNSHVDKIDDRFGE
ARHAAGENTSRNEPMSVDFSIFGAKPPTRPTINSADRTHLKRKLDLEFQHPE
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atggcagaggtcgatctgacgaagaaagtggcggataggtatctgaagcgcgaggttctt
ggtgaaggtacctatggagtcgtctacaaagccattgatacgaagacaggacagacagtt
gctattaaaaaaattcggcttggaaagcaaaaggaaggggtgaatttcacagccctcaga
gaaattaagctgcttaaagagctgaaagatccgaacataattgagttgattgaagcattc
cctcataaaggaaacttgcatcttgtatttgagttcatggaaacggaccttgaagctgtt
atacgtgatcggaatatattcctatcaccagctgacataaagtcataccttcagatgacg
ttaaaaggacttgctgtttgccacaagaaatgggttttacacagggatatgaagcctaac
aacttgttgataggacctaacgggcagcttaaacttgcagattttggtttagcacgaata
tttgggagcccagatcgcaggttcactcatcaggtctttgcccgttggtatagagcacct
gagctgttatttggcaccaagcaatatggacctggggtagatgtttgggctgcggcttgt
atattcgctgaacttctcttacgcagaccctttttgcagggatcaagtgatattgatcaa
ttaggaaagatttttgcggcttttgggactccaacaccttctcagtggcctgatatggta
tacctccgggattatgtggaataccaatatgttccagcaccccctttgcgttcattgttt
ccagtggctggtgatgatgccctggatttgttagcgaagatgtttacttatgaccccaaa
gttagaatttccgtacagcaggcattagagcacaggtactttacatctgcacctcttcct
acgtatccagacaagcttcctagacctgctccaaagcgggaatctaaggcttctgatttt
gatccaaatgatggtcctactgtgttatcacctcctcgaaaatcaaggagagtgatgcca
aagcgtgatggttttgaaggaaattcacatgttgataagattgatgatcgtttcggtgaa
gccagacatgctgctggtgaaaatacaagcaggaatgaaccaatgtcagttgatttttct
atctttggagcaaaacctccaactagacctactattaatagtgctgacagaacacatcta
aagaggaaactagatcttgaatttcaacatcccgaataa
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