KEGG   Malus domestica (apple): 103438054
Entry
103438054         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X1
  KO
K03267  peptide chain release factor subunit 3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    103438054
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103438054
   03012 Translation factors [BR:mdm03012]
    103438054
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     103438054
Translation factors [BR:mdm03012]
 Eukaryotic type
  Release factors
   103438054
SSDB
Motif
Pfam: GTP_EFTU GTP-eEF1A_C GTP_EFTU_D3 GTP_EFTU_D2 MMR_HSR1 EF-G_D2
Other DBs
NCBI-GeneID: 103438054
NCBI-ProteinID: XP_028959922
LinkDB
Position
06:complement(join(34119474..34119541,34119630..34119702,34119849..34120013,34120119..34120183,34120681..34120816,34120918..34121023,34121470..34121620,34122622..34122686,34122810..34122964,34123065..34123127,34123237..34123308,34123465..34123510,34123854..34123965,34124129..34124224,34124383..34124439,34124945..34125016,34125128..34125169,34125618..34125621))
AA seq 515 aa
MDIEEEIRSLQLDSAAEDNGVVNPDEAKPEVENDNKMEEDSREEIHKQSDKSVVVEHKGK
EKETPDPEEEHDDMELDKKRHLNVVFIGHVDAGKSTTGGQILFLSGQVDDRTIQKYEKEA
KDKSRESWYMAYIMDTNEEERVKGKTVEVGRAHFETETSRFTILDAPGHKSYVPNMISGA
SQADIGVLVISARKGEFETGYERGGQTREHVQLAKTLGVSKMLVVVNKMDEPTVNWSKER
YDEIVTKMVPFLKASGYNVKKDVQFLPISGLMGTNMKTRLDKSVCSWWNGPCLFEALDSI
EVPLRDPKGPFRMPIIDKFKDMGTVVMGKVESGSVREGDSLFVMPNKVPVKAVAIYIDED
RVKRAGPGENLRVRLSGIDDEDILSGFVVSSVAKPIPAVTEFFAQLQILELLDNAILTAG
YKAVLHIHSIVEECEIIELVSQIDPKTKKPMKKHIRFVKNGAIVVCKIQVSNTICIEKFA
DFPQLGRFTLRTEGKTIAVGKVIDQPSNYRNNSSA
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggatatcgaggaggaaatccgatcgttacagcttgattcagcagcagaagataatggg
gttgttaatccggacgaagcaaagccggaagtagagaatgataataagatggaggaagat
tccagggaagagattcataaacagtctgataagtcagttgtagttgagcataaagggaag
gagaaggaaaccccggatccagaagaagaacatgatgacatggaattagataagaagagg
cacttgaatgttgtttttattggccatgttgatgctggaaagtccacaacagggggccaa
atactttttcttagtggtcaggttgatgatcgtacaatccaaaaatatgaaaaagaagca
aaggacaaaagtagggaaagctggtatatggcttatattatggacaccaatgaagaagag
agagttaagggtaaaacagttgaagttgggcgggcccactttgaaaccgagacatcaaga
ttcacgattttggatgcacctggccacaaaagttatgttccaaatatgatcagtggtgca
tctcaagctgatataggagtactggtaatttctgctcgtaaaggagaatttgaaaccggg
tatgagaggggtgggcagacccgtgaacacgttcaacttgctaagacattgggtgtgtcc
aagatgcttgttgttgtaaataaaatggatgaacccactgtgaactggtcaaaagaaagg
tacgatgaaattgtgacaaaaatggtaccattccttaaagcatcaggctacaatgtgaaa
aaagatgtgcaattcctacctatatctggcctgatgggaacaaatatgaaaaccagattg
gataaaagtgtatgttcgtggtggaatggtccctgccttttcgaagcccttgattctatt
gaagttcctctacgagatcctaaaggtccattcaggatgcctatcatagacaaattcaag
gacatgggaacagttgttatgggcaaagtggaatctgggtccgtgcgtgaaggggattca
ttgtttgtcatgccaaataaggtcccagtgaaagctgttgctatatacattgatgaagat
agggtgaaacgtgcgggcccaggtgaaaatctacgggttagattatcaggcattgatgat
gaggacatattgtcgggctttgttgtgtcgagtgttgcaaagccaatacctgccgttaca
gaatttttcgcccagttgcagattcttgaactgcttgacaatgcaattttgacggctggc
tataaagctgtcctgcatattcactcaattgttgaagaatgtgagattattgagcttgta
agtcaaattgatccgaagacgaagaaacctatgaaaaagcatattcgttttgtcaagaat
ggtgccattgttgtgtgcaagattcaggtcagcaacacgatatgcattgagaagtttgcg
gactttccacaacttgggaggtttactcttcgtactgaaggaaaaactattgcagttgga
aaagtgattgaccaaccatcaaattaccgcaacaattcaagtgcttaa

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