KEGG   Malus domestica (apple): 103438276
Entry
103438276         CDS       T03194                                 
Name
(RefSeq) DNA polymerase epsilon subunit B
  KO
K02325  DNA polymerase epsilon subunit 2 [EC:2.7.7.7]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03030  DNA replication
mdm03410  Base excision repair
mdm03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103438276
   03410 Base excision repair
    103438276
   03420 Nucleotide excision repair
    103438276
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103438276
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103438276
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103438276
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    103438276
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      103438276
SSDB
Motif
Pfam: DNA_pol_E_B
Other DBs
NCBI-GeneID: 103438276
NCBI-ProteinID: XP_008375037
LinkDB
Position
06:complement(join(34893863..34894003,34894130..34894240,34894350..34894464,34894628..34894727,34894842..34894936,34895016..34895146,34895242..34895322,34895454..34895558,34895780..34895857,34896046..34896177,34896283..34896436,34896535..34896709,34896817..34896985))
AA seq 528 aa
MSSSGRKKVQRKCKIRGYTLDPDAVDEILSFASNFDDSAPDDDAIDLLLDFLETQPRKDK
ETVHRLVTKLSRADAAVYDGDDDGGGGTSEPDWHIIDAFKVPKFRYDPIKKSFYRHTGRL
SIHGEASAKSALYRDRFLLLSQIISRQKEFSRPAFGSKSSDAGRREISPIQSLIGQTGRR
WVMGLISQLEDGHFYLEDLSSSVEIDLSNAQITAGFFVENTIVVAEGEMLLEGVFQVITC
GFPPLEPRDESLQFIAGNDFFGSSSLTEEETLRLAKLDRTVANDNVVILSDIWLDDEEAM
GKLETVFSAFEDEEFVPCLFVLMGNFCSRPCNLAFHSFSSLRLQFGKLGKMIAAHPRLVE
GSCFLFIPGPDDAGPSTALPRNALPKYLTEELQTHIPNAIFSSNPCRLKLGTKEVVFFRQ
DLLYRMRRSCLVPPCTVETDDHFEHLVATITHQCHLCPLPLIVQPIIWNYDHSLYLYPTP
DTIVLGDRSDQKAFKYTGITCFNPGSFSSDSTFVVFRPCTQEVELSSL
NT seq 1587 nt   +upstreamnt  +downstreamnt
atgagcagctcggggaggaagaaggtgcagaggaagtgcaagatcagagggtacacgctt
gacccggacgccgtcgacgagatcctctccttcgcgtccaatttcgacgactctgctccc
gacgacgatgccatcgatctcctcctcgacttcctcgagacccaaccccgaaaagacaag
gagacggtgcaccgcctcgttaccaaactgtcgcgtgctgatgcggccgtctacgacggc
gatgatgacggtggtggtggtacctcggaacctgattggcacataattgatgccttcaag
gtcccaaagttccgatacgatcccatcaagaaaagtttctacaggcatactgggagatta
tctattcatggcgaagcatcggctaaatcggctctgtacagggataggtttctcttgctc
tcccagattatctctcgccaaaaggagttttccagaccggcatttggttctaaatcgtcg
gatgcaggtcgccgcgagatatctccaattcagtccctgattgggcaaaccggaaggaga
tgggtgatgggtctgatatctcagttggaggatggccatttttacttggaagacctttct
tcgtctgtggaaatcgacttatcgaatgcacagataaccgcagggtttttcgtggagaac
acaatagttgttgcagaaggtgagatgcttttagagggtgtctttcaggtgattacttgt
ggatttcctccgcttgagcccagagacgagtccctccaatttattgcagggaatgacttt
tttggtagtagttctctaacagaagaggagactcttagacttgcaaagttggataggaca
gtagctaatgacaatgtcgtcatactatctgacatttggctcgacgatgaagaggctatg
ggaaagctagagacagtattcagtgcctttgaggatgaagaatttgtaccatgcttattt
gtactcatggggaatttttgctctcgcccgtgtaatcttgcttttcattctttctccagt
ctcaggttgcagtttggcaagctagggaagatgattgcagcccatccacggctagtagag
ggtagttgttttctatttatcccaggtcctgatgatgcaggcccttcgacagctctgccc
aggaatgctttaccaaaatatttaacggaagagcttcaaactcacattccaaatgccata
ttttccagtaatccttgcagattaaagttgggtaccaaggaggttgtatttttccgtcaa
gatctgctctacagaatgcgtcgttcctgtctggttcccccttgtacagtagaaactgat
gatcacttcgagcatcttgttgccaccataacccatcaatgtcatctctgcccactccct
cttattgtacaacccatcatttggaattacgatcactcgctttacctctatccaactccc
gacacgatagttttaggtgacagaagtgaccagaaggctttcaaatacacaggaatcact
tgttttaatcctggttccttctcaagtgatagtacctttgtggtattccgtccctgcacc
caggaagtcgaattgtcgtccttgtag

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