Malus domestica (apple): 103438347
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Entry
103438347 CDS
T03194
Name
(RefSeq) cysteine protease ATG4 isoform X1
KO
K08342
cysteine protease ATG4 [EC:3.4.22.-]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
103438347
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
mdm01002
]
103438347
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103438347
03029 Mitochondrial biogenesis [BR:
mdm03029
]
103438347
Peptidases and inhibitors [BR:
mdm01002
]
Cysteine peptidases
Family C54: Aut2 peptidase family
103438347
Membrane trafficking [BR:
mdm04131
]
Autophagy
Autophagosome formation proteins
Atg8 conjugation proteins
103438347
Mitochondrial biogenesis [BR:
mdm03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
103438347
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_C54
Rap1-DNA-bind
Motif
Other DBs
NCBI-GeneID:
103438347
NCBI-ProteinID:
XP_028954724
LinkDB
All DBs
Position
07:complement(join(189802..190022,190120..190190,190260..190315,193115..193253,193758..194137,194289..194339,194665..194750,194832..195291))
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AA seq
487 aa
AA seq
DB search
MKGFCETAVASKYSSKSSTDSTDRGSSSACSDSGSRDSKHNKASLWSNFFASAFSIFETH
SESSITEKKESHSRNNGWTEAVRKAVTSGSMRRIHERVLGSSRTGISSASDIWLLGVCYK
VSQDDSSGDAPINNGLGAFEQDFSSRILMTYRKGFEAIGDSKYTSDVNWGCMLRSSQMLV
SQALLFHRLGRSWRRPLHKPLDEAYIEILYHFGDSETSTFSIHNLLQAGKAYDLAAGSWV
GPYAMCRTWETLVRCRREATDLDDQPLPMAVYIVSGDEDGERGGAPVVCIEDASRHCLEF
SRGQVDWTPILLLVPLVLGLEKVNPRYIPSLRATFTFPQSLGIMGGKPGVSTYIIGVQDE
KALYLDPHEVQPVINIRRDDMEADTLSYHCNVIRHIPLDLIDPSLAIGFYCRDRDDFNDF
CFRASKLADESNGAPLFTVTQTHSVPRPVNHSDALGDSGAVENDDSFSVLPMSDADGSAQ
EDDWQLL
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaagggtttttgtgagacggctgttgcatcgaaatattcttctaaaagttcaacagat
tcaacagatagaggttcatcgtctgcttgttcagattcaggatctagggacagtaagcac
aataaggcatccctgtggtcaaacttctttgcgtccgctttctcaatcttcgaaacacat
agtgagtcatcaattactgaaaagaaggaaagtcactctagaaacaatggatggacagaa
gctgtgaggaaagctgtgactagtggatctatgaggagaattcacgagcgtgtacttgga
tccagcaggactggaatttcttctgctagtgacatatggcttcttggtgtgtgctataag
gtctcacaagatgattcctccggagatgcacctattaataatggattaggagcatttgaa
caggatttctcatcaagaattttgatgacatatcgtaaaggatttgaggctattggagat
tcaaagtacactagtgatgtaaattggggttgcatgctccggagtagtcagatgcttgta
tcccaggcgttgcttttccatagattgggaagatcttggagaaggcccttgcacaagcct
ttagatgaagcatatattgagatcttgtatcatttcggtgattccgaaacatcaactttc
tccatccacaatcttcttcaggctggaaaggcttatgacctcgctgccggatcatgggtt
ggcccatatgccatgtgccgcacttgggagactctagtacgatgtaggagagaagcaact
gatcttgatgatcagccacttccaatggctgtttatattgtttctggggacgaagatggg
gagcgaggtggagccccagtagtctgcattgaagatgcttctagacactgtttggaattc
tcaagaggccaagttgattggacgcctattcttttattggttcctttggttcttggactt
gaaaaagtcaaccccaggtacattccatcgttgcgggcaacattcacctttccccaaagt
cttggcatcatgggtggaaaacctggtgtgtcaacttacattattggtgtgcaggatgaa
aaagcactttaccttgatccccatgaagttcagccggtaatcaatataagaagggatgat
atggaggctgatactttatcttaccactgcaatgttatacggcacattccccttgatttg
attgatccatccttggcgattggattttattgtcgtgacagagatgattttaatgatttt
tgttttcgagcctccaagctggcagatgaatcaaatggtgctccactgtttactgtgact
cagacacatagtgttcccaggccggttaaccacagtgatgcgttgggtgatagtggtgca
gtagaaaacgatgattcattttctgttctgcccatgagcgatgcagatggaagtgcacaa
gaagatgactggcaactcctatga
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integrated database retrieval system
