Malus domestica (apple): 103438502
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Entry
103438502 CDS
T03194
Name
(RefSeq) polygalacturonase-like
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103438502
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103438502
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Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
Beta_helix
Motif
Other DBs
NCBI-GeneID:
103438502
NCBI-ProteinID:
XP_008375262
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All DBs
Position
07:join(1149678..1149923,1150132..1150263,1150719..1150883,1151411..1151431,1151606..1151813,1152489..1152570,1152665..1152773,1152948..1153064,1153308..1153535)
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AA seq
435 aa
AA seq
DB search
MQLCLCQKVKVTMFSQSQFLSVLLIILASFPFSFSSDLGNPLVVLDLHRHHRTRRLQSTS
ANNFTVNVDRFGAKGDGGDDTQAFMKAWEKACSSERGVELVVPKDRVYHLKPMNFSGPCK
SHVTLKIYGTIKASTKRSDYTDRRHWILFTNLNNFTVEGGGTINGNGRKWWQNSCKVNES
LPCTLAPNAVTFFGCNTLEVDNVRFRNAQQMHLSFESCVNVKASNLIVTAPGDSPNTDGI
HVTATQNIRISNCLIRTGDDCISIVSGSKNVRAEDITCGPGHGISIGSLGAGNSQAEVSD
VVVSRAKITGTTNGLRIKTWQGGSGNATNIRYKNVMMANVSNPIIIDQHYCDQDSPCQEQ
DSAVKISNVVYENVKGTSASKVAVKFDCSKRFGCQEILLKDVNLRPLANGIAQASCEHVD
LSHSGTVSPKCSSLI
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgcaattgtgtctgtgtcaaaaagtgaaagttacaatgttttcacaaagccagtttctc
tcagtacttctcataatattagcttcgtttcccttctcttttagtagcgacctagggaac
ccactagttgtacttgatcttcatcgtcaccatcgaacaagaaggcttcaatcaacttca
gcaaataattttacagtaaatgtggatcgttttggagcaaaaggagatggaggggatgat
acccaggcatttatgaaggcttgggagaaggcttgttcttctgaaagaggtgttgagctt
gtggttcctaaggatagggtctatcatctgaagccaatgaatttctccggcccttgcaaa
tctcatgtcacgctcaagatctatggaaccatcaaagcctctaccaaacgatcagattac
acggatagacggcattggattttgtttacaaatttgaataactttacagttgaaggtggt
ggcaccatcaatggcaatggaaggaaatggtggcaaaactcatgcaaagttaatgaatcc
cttccttgcacgctcgcaccaaatgccgtgactttcttcggttgcaacactttggaagta
gacaatgtgaggttccgaaatgcccagcaaatgcatctatcttttgagtcgtgtgtgaat
gtaaaagcttcgaatctcatagtgaccgcaccaggcgatagcccaaacacagatggaatc
cacgtcacagcaacacaaaatattcggataagcaactgtctcattagaacaggtgatgac
tgtatttcgatagtaagtgggtcaaaaaatgttcgagctgaggatataacctgcggacca
ggtcatggaattagcattggaagcttaggagctggaaattcacaagcagaggtttcagat
gtggtggtttctagagccaagattactggcaccactaacggattaagaataaagacttgg
cagggcgggtctgggaatgcaacaaacatcagatacaaaaatgttatgatggccaatgtg
agcaatccaattatcatagaccaacactattgcgatcaggattcaccgtgccaagaacag
gattcagctgtgaaaataagcaatgtggtatatgagaatgtgaaaggcacaagtgcttca
aaagtggcagtgaaatttgactgcagcaagcgtttcggatgtcaagaaattttgttaaaa
gacgtaaacctaagacctctagccaatggaattgcccaagcttcgtgtgagcatgtcgat
ttaagccatagcggaacagtttctccaaaatgctcttcgttaatttaa
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