Malus domestica (apple): 103438683
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Entry
103438683 CDS
T03194
Name
(RefSeq) nuclear pore complex protein NUP98A-like isoform X2
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mdm
Malus domestica (apple)
Pathway
mdm03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103438683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103438683
03036 Chromosome and associated proteins [BR:
mdm03036
]
103438683
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103438683
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103438683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103438683
NCBI-ProteinID:
XP_008375448
LinkDB
All DBs
Position
06:join(25496080..25496125,25496352..25496552,25496959..25497333,25497438..25497632,25497726..25498132,25498226..25498298,25498375..25498494,25498577..25498780,25498885..25499267)
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AA seq
667 aa
AA seq
DB search
MGGDSFRFPGWGSTHSCGNSSGSPFYSQSFLEHEWRNNNVSAPNLCRCGQNGLFGAAQSS
WPFPPFGVPYTPDLSLSLSPIAGFWMFVPFSSTCIPAFASASTPAFGATGFAPFARTTSP
MFGSRGDGSYGGSFGASNTPAFGSSSSTVGTSSNQAFGASSTTGFGSFSSTQPLSSSPTS
AFAQSSSRFSSSPFGASSPFGSQCFPFGQSTTIGNTRQSAFGGQQHNGSSVASYTATLAV
DDSRKVESISAMPVYKDKSHEELRVEDYKLGKGVQFPAGGSTIDISTSQPNRLHPAPSLL
QPSSSPFSTSTSSNISAPETLSFTSQGIVFTPPSPSVFRQTSSLSPLSSSTSSGFSCLAP
AQTSNSAPPAMQICIGRSATPFGQKNTPFRSSSEASSTSNPISFGQATPLFVSSQPLQSS
GSVFNIVSQNQQGNPGGSTGILGQNGFESFSSTPAFGQLSYMSSCCQLCASCGAQSTTGN
IALGKPVSEGRHQGSGVPTTVTNTAYGEPDEKIHSISSMPIYGDRSHEEMRWQNYQLGDK
GGPALGGVTHFHLLTKKPAPTFAQTSLSLSNTSTVSNISAPQNPSITAAGFGASSTPNLF
ASSSSTASLFGPIPSPSFSSSSAAPASTFAFPSPAPATTSTCNHGLFGCMPSVAQTGTTN
AVQTNFL
NT seq
2004 nt
NT seq
+upstream
nt +downstream
nt
atgggtggtgattcctttcggtttcctggctggggttcaactcactcttgtgggaattcg
tctggaagtccattttattcccaatcgttcttggagcatgaatggcgcaacaacaacgtt
tctgctcccaatctctgcaggtgcggtcaaaatggtttgtttggagcagcgcaatcttct
tggccgtttcctccttttggagtaccttatactcctgatctcagtctctcattgtcacca
attgctggtttctggatgtttgttccctttagttcgacatgcatcccagcctttgcctct
gctagcacaccagcttttggtgcaacaggctttgcgccctttgctagaacaacaagtcct
atgttcggaagcagaggagatgggtcttatggtggatcatttggagcttcaaacaccccg
gcttttggttcatctagctccaccgtcggtacttcaagcaaccaagcttttggtgcttca
agtactactggttttggttcatttagtagtacacaacctttgagctcttcaccaacttct
gcatttgcccaatcaagttccagattcagtagcagcccatttggtgcttcgtctcctttt
ggatcacagtgttttccatttggtcaatcaacaacaattgggaacaccaggcagtcagct
tttggtggccaacaacacaatggtagtagcgtggcttcatacactgcaactcttgcagtt
gatgatagtaggaaagtggagtcaatatctgcaatgccagtatataaagacaaaagtcat
gaagaactccgtgtggaagattataaattggggaaaggtgttcaatttcctgccggtggg
agtaccattgacatttctacctcacagccgaatcgtttgcatcctgcaccatcacttctt
caaccatcttcaagtccctttagtacctctacttcgtctaatatatctgctccagaaacc
ctatcattcacttctcaaggcattgtttttacaccaccatctccttcagtttttcgacaa
acatcatctctgtctccattaagttcatcaacctcatctggattttcatgtcttgctcct
gctcaaacatcaaattctgcgcctccagctatgcagatatgtattggacgaagtgccact
ccctttgggcagaagaatactccatttaggagctcctctgaggctagttctacaagcaac
ccaatttcttttggtcaagctactcctttgttcgtgtcatctcagcctcttcagagtagt
ggttctgtcttcaacattgttagtcaaaatcagcaaggcaacccaggtggttcgacagga
attcttggtcagaatgggtttgaaagcttttcatcaacccctgcgtttggtcaattaagt
tatatgtccagttgctgccagttatgcgcttcatgtggagctcaatcaacaactggaaac
attgctctggggaagccagtttctgagggtcggcatcagggaagtggtgtacctacaact
gtaacaaacactgcttatggtgaaccggatgaaaaaatccactcaatatcgtcaatgcca
atttatggagacagatctcacgaggaaatgagatggcagaattatcaattgggggataaa
ggtggaccggctcttggtggtgtgactcactttcacttgcttaccaagaaacctgcaccg
acatttgctcaaacatcattgagtctgtccaatacctctactgtatctaatatatctgct
ccgcaaaatccatccattactgctgcgggctttggagcctcatccacacccaatcttttt
gcatcttcatcatcaactgcttcattatttggaccaattccatctccgtccttttctagt
tcatcagctgcaccagcatctacatttgcatttccttctccagctccagcaacaacttcg
acatgcaatcatggcctattcggttgcatgccgtctgttgcacaaacaggtaccactaac
gccgtgcaaactaacttcctctag
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