KEGG T03194: 103438958

Malus domestica (apple): 103438958

Entry

103438958         CDS       T03194

Name

(RefSeq) DNA replication ATP-dependent helicase/nuclease JHS1

K10742

DNA replication ATP-dependent helicase/nuclease Dna2 [EC:5.6.2.3 3.1.-.-]

Organism

mdm Malus domestica (apple)

Pathway

mdm03030

DNA replication

Brite

KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    103438958
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103438958
Enzymes [BR:mdm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     103438958
DNA replication proteins [BR:mdm03032]
Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    103438958
Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     103438958

SSDB

Motif

Pfam:

Dna2 AAA_12 AAA_11 AAA_30 AAA_19 UvrD-helicase Cas_Cas4 ResIII nSTAND3 AAA_18 SMUBP-2_HCS1_1B

Other DBs

NCBI-GeneID:

103438958

NCBI-ProteinID:

XP_028961324

LinkDB

Position

07:complement(join(8561094..8561264,8561394..8561513,8561645..8561785,8561920..8561993,8562085..8562124,8562598..8562735,8562817..8562909,8563001..8563078,8563486..8563637,8563718..8563787,8564035..8564202,8564391..8564495,8564590..8564662,8564759..8564877,8565062..8565136,8566075..8566320,8566431..8566565,8567901..8567957,8568061..8568171,8568247..8568304,8568426..8568481,8568617..8568772,8569179..8569244,8569381..8569463,8569619..8569715,8569844..8569954,8570090..8570222,8571305..8571366,8571450..8571503,8571598..8571807,8572079..8572135,8572403..8572612,8572697..8572864,8573057..8573515))

AA seq 1381 aa
MAPRKKPISSNTTSSKKSNSKAQPQPSKFGIQHFFERHTQNSQKPKEVAASSPPQNPKTL
AATVSPTVAPVQSVPKIRKPAQIDAGNAVLALVNDEIQSISQLGNKNSMSKYTPPENVMA
AGIGGDKENVDDEASPEISKSKSLKRFKFSPGMLIKQSQDDGGDEVTWRISPVNERLQAV
SKRMPEIIRVLADSSRLKSLSISQCSQNKTSPVKAVTVEKWIPSPTPNTSDRSLVSLNRV
GVKRVKPEQDMDSNVAFSGIDSRQSPFRTPPSLPYCHDKLANACNGVSDQPGLRQHKKAL
LELLDQVEDVISVEDSVSSDVEESPFQVEDKKSKRMPISLDHTVKRVETALTGKVLRKSS
YCSFLVLEVSEKCGDADSSGDQCLFKVIRLLNEQSGEERSVYLRDEWLYSVIAPGDTVNV
IGEFDNQGQCHVDRHNNFIIVHPDVLVSGTRVTASFICPRRTVLDERLKSNEHSTAALSG
TILHRVFEAGLMKEIPTVTFLEECTRTVLQKNLENLYACGVNENDMYKTLIEAVPKILNW
VNLFKNSQGSKAPSVDFGSDIGVKKVKLSEVIDIEEMAWAPKYGLKGQIDASVRVEVESN
SGESHEKVIPLEFKSGKVPKGQSSMEHSAQVILYTLLMSERYQKHVDTGLLCYLQSDQTQ
GIVARRSDLVGLIMRRNELANDILKASQTQVLPPMLQCQSICGSCRHLNVCTVYHKVHGG
STESSGLADLFDSNTQYLTIAHGVFLRLWDGLIDLEAKEMQLVKNEIWRSHSSNSDYAAG
CLSFIVLDGDSPSSASGKDSRFVYRFLRKSFPSLNGRTSDIDFSSASSSRKDIDCTLKCG
DFVILSSESGNLPVASGIITDISQSHVSVSFSKHLRLPWSNPSEASDLLQEVWRVDKDDF
VTSFSVMRFNLVQLFLQSTQAAHLRKMIVDLEAPRFDNGSPLSQDPAISYVWSQRNLNDD
QRRAILKILTAKDYALILGMPGTGKTSTMVHAVKALLIRGSSILLTSYTNSAVDNLLVKL
KAEDIDFIRIGRHEAVHEEIRGHCFSEMNIQNVEGIKLILDQVKVVAVTCLGITSPLLAN
KRFDVCIMDEAGQTTLPVSLGPLMFASKFVLVGDHYQLPPLVKSTEARENGMGVSLFCRL
SEAHPQAISALQSQYRMCRGIMELSNALIYGDRLRCGSPEIENAKLKVSSSIPHSFWIQE
VINPSKPVIFINTDSLPAFEAKDHKIVSNPTEANIIVQVVEGLVKSGIKGEDIGVITPYN
SQAEIIRLALSRLTSVEIHTIDKYQGRDKDCILVSFVRSTENPTNCSSSLLGDWHRINVA
LTRAKKKLVMVGSCKTLSNVVLLKLLIEQVEQQSGILNVSNKDIKFKRELKGCSQAQAQA
R

NT seq 4146 nt +upstreamnt +downstreamnt
atggctccgagaaagaaacccatttcttccaacacgacgtcgtctaagaaatccaactcg
aaagctcagccgcagccctccaagttcggcatccaacatttttttgagcgccacacccag
aactcccagaaacccaaagaggtcgccgcttcttcccctcctcagaaccctaaaacccta
gccgccaccgtctcccccaccgttgctccagtacaatcggttccaaagatccgaaagcct
gcacagattgatgcgggcaatgcggttttagctttggtgaatgatgaaattcagtcgatt
tcgcaattggggaataagaatagcatgtcgaagtacacaccgccggagaatgtgatggcg
gccggaattggtggtgataaggagaatgttgacgatgaggcctcgccggagatttcaaag
tctaagtctttaaagcgcttcaagttttcacctggaatgttgattaagcagagccaagat
gacggaggtgatgaggtaacatggaggatatctccggtaaatgaaagactccaagctgtt
tcaaaacgcatgccggagattattagagtgttggctgactcttcaaggcttaaatcttta
agcattagtcagtgctcgcaaaacaagacttctcctgttaaagctgtaacggttgagaag
tggattccctcaccgacaccgaatacttctgatagatcgttggtatccctgaatagggtt
ggtgtaaaaagagttaaaccagaacaggatatggatagtaatgtagctttttcaggaata
gatagtaggcagagtccattccgaactccaccttctctaccgtactgtcatgataagctt
gctaatgcatgtaatggagtttcagatcagccggggttgaggcagcataaaaaggcattg
cttgaactcttagatcaagtggaagatgttatttctgttgaagattcagtgtctagtgat
gtggaggaatctccatttcaagttgaagataaaaaaagcaagagaatgcctatcagtttg
gatcacacagttaaaagagtagagacagctctaacaggaaaggttcttcggaaatcttca
tattgtagttttcttgtattggaggtatctgagaagtgtggagatgctgattcatctggt
gatcaatgcctgtttaaggttataaggttactaaatgagcaaagtggagaagagcgctct
gtatatttacgagatgagtggttgtacagtgtcattgctcctggagatactgtcaatgtt
attggcgaatttgataaccaaggacagtgtcatgtggatcgtcacaataattttataatt
gttcatccagatgttttggtgtctggaactagggttacagctagcttcatttgccctagg
cgaactgtcctggatgaaagactaaaatccaatgagcattcaactgcagcactaagtggt
acaatattgcatcgagtttttgaggctggacttatgaaggagatacctacagtaactttc
ttggaggaatgcacaagaacggtgctccagaaaaaccttgagaacttgtatgcttgtgga
gtgaacgaaaatgatatgtacaaaacattgatcgaggctgtccccaaaatattgaattgg
gttaacctcttcaaaaattcccagggttcaaaagctccttctgttgattttggatctgac
attggggtgaaaaaggtcaaattatctgaggtaattgatattgaggagatggcctgggct
ccaaaatatggtctgaaaggccagattgatgcttctgtcagagtggaagttgaatctaac
agtggtgaatctcatgaaaaggtcatacctttagagttcaaaagtgggaaagtaccaaag
ggacagtcgtctatggagcatagtgcccaagtgatcttatacactctcctcatgtcggag
aggtaccagaagcatgtcgatactggtctcctatgttatctgcagtcagatcagacacag
gggattgttgctagaagatctgacctagttggtctaatcatgcgacgtaatgaacttgca
aatgatatcctcaaggcatcacaaacacaagtactgcccccaatgttacagtgtcagagc
atttgtggaagttgccgccatctaaatgtttgtactgtctatcacaaggtacatggtgga
agcacagagagcagcggattggcagatttgtttgattcaaatactcagtacctaacaatt
gctcatggtgttttcttaaggctgtgggatgggttgattgatttggaagctaaagagatg
cagcttgtaaagaatgaaatttggcggtcgcatagctccaatagtgattatgccgctggt
tgcctttcttttattgttcttgatggtgattctccatcttcggcatccggaaaagatagc
agatttgtttatcgttttttgcgtaagagttttccttctctcaatgggaggacatctgat
atagatttttcaagcgccagttcttcaagaaaagatatagattgcacactaaaatgtggt
gactttgtgatacttagcagcgaatctggtaatctacctgttgcaagcggaatcataacg
gatataagtcaatcccatgtttctgtttctttctctaagcacttacgacttccttggagc
aatccttcagaggcaagtgatctccttcaggaggtctggcgtgttgacaaagatgatttt
gtgacatcattttcagtaatgaggtttaaccttgttcaactttttcttcaaagtacacaa
gctgctcaccttagaaagatgattgttgacctagaagctcctaggtttgataatgggtct
ccactcagccaggatccagcaatatcctatgtctggtcccagagaaatttaaatgatgat
cagcgtcgagccattcttaagatacttacagcaaaggactacgctcttatactaggaatg
cctggaacgggcaagacatccaccatggtgcatgctgtgaaagccctgttgattagaggt
tcatccattttgcttacgtcctacacaaactccgctgttgataatctacttgtcaaatta
aaggctgaggatattgattttatacgcattggaagacatgaagctgtgcatgaagaaatt
cgaggccattgcttctcagagatgaacattcaaaatgtggaaggcattaagttaatatta
gaccaagtcaaggtggttgccgttacatgcttggggatcaccagccccttgcttgccaat
aagagatttgatgtatgcatcatggatgaagctggacagaccacccttccagtatctctt
gggcctctgatgtttgcttcaaagtttgtcctggttggcgatcattatcagttacctcct
ctggtcaagagtacggaggctagagaaaatggaatgggggtaagcttgttttgtaggctt
tcagaagcgcatcctcaggcaatttcagccttgcaaagccagtaccgtatgtgtcgaggc
attatggaactgtcaaatgccttgatatatggtgatcgattgcgatgtggctctcctgaa
atagaaaatgccaaactcaaggtttcaagttcaatacctcattcattttggatacaggag
gttataaacccaagcaagccagttatatttattaatacagattctttacctgcttttgag
gcaaaggatcacaagattgtgagtaacccgacggaagctaacataattgtacaggttgtg
gagggactagtcaagagtggaataaagggggaagatattggtgtcattacgccatataac
tcccaggcagagatcatccggcttgccctcagccgcctgacctctgttgagatacatacc
attgacaaataccagggaagagacaaggattgtatactagtgtccttcgttaggtcaacg
gaaaatcccacgaattgctcctcctcgctgcttggagactggcataggattaatgtagct
ctcactcgtgccaagaaaaagttggtaatggttggatcgtgcaaaaccctatcgaatgtt
gtgctgttgaagcttcttatcgagcaagttgaacaacagtcgggcatcttaaatgtatcg
aacaaggatattaagtttaaaagagagttaaagggatgctctcaggctcaggctcaggcc
agatag

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