KEGG   Malus domestica (apple): 103439020
Entry
103439020         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K12831  splicing factor 3B subunit 4
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103439020
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103439020
Spliceosome [BR:mdm03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    103439020
 Complex B
    103439020
 Complex C
   U2 SnRNP specific factors
    103439020
SSDB
Motif
Pfam: RRM_1 RRM_7 OB_RNB RRM_5
Other DBs
NCBI-GeneID: 103439020
NCBI-ProteinID: XP_008375788
UniProt: A0A498JI45
LinkDB
Position
07:complement(join(12423168..12423655,12423995..12424088,12424486..12424572,12424858..12424923,12425020..12425082,12425268..12425324,12425445..12425533,12425939..12425987,12426131..12426235))
AA seq 365 aa
MTTRIAPGVGANLLGQHSAERNQDATAYVGNLDPQVSEELLWELFVQAGPVVNVYVPKDR
VTNLHQGYGFVEFRSEEDADYAIKVLNMIKLYGKPIRVNKASQDKKSLDVGANLFVGNLD
PDVDEKLLYDTFSAFGVIVTNPKIMRDPDTGNSRGFGFISYDSFEASDAAIEAMNGQYLC
NRQITVSYAYKKDTRGERHGTPAERVLAASNPTSKSRPHTLFASGPPTLANGPQSNGTMG
APVPPRPFANGGLGIPPLRPPPPQGMGFPPMQMAVQPTWQGQPQQPGQMPPPQMQQFRPP
PNMPPPPPQSAPAPPRSLPPPMAMGNQQPMWRPPPPPQMRPPNMQHASMPPPPPLNNPLP
PPPMN
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgacgactcgaatagctccgggagtaggagccaacttgctcggccaacattccgccgag
agaaaccaagacgccactgcgtacgtcggcaatctggaccctcaggtttccgaagaattg
ctgtgggagttgtttgttcaagctggccctgttgtgaatgtgtatgttcccaaggataga
gtgacaaaccttcatcaaggatatggatttgttgaattccgtagtgaagaggatgctgat
tatgcaatcaaggtgcttaatatgatcaaactttacggcaaaccaatacgtgtaaataag
gcatcccaagacaaaaagagcttggatgtaggggcaaaccttttcgttggaaatctcgat
cctgatgtggatgagaagcttctctacgatacattcagtgcatttggagtcatagttaca
aatccaaagataatgagagaccctgatactggaaattcccgtggatttggcttcattagt
tatgattcttttgaggcatctgatgcagctattgaggcaatgaatggccagtatctgtgc
aatcgtcaaataacagtgtcatatgcctataagaaggatactagaggagagcgtcatggt
actccagcagagagagttttggctgcaagcaatcctacttcaaaaagccggcctcataca
ctgtttgctagtggtcctccaacacttgccaacggtcctcagtccaatggtaccatgggt
gctcctgtgcctccacgacctttcgcaaatggtggtctcggtattcctcctcttcgccca
ccacccccgcaaggcatgggtttcccacccatgcagatggctgtacaaccaacctggcaa
ggtcagccacagcaaccaggtcaaatgcctccacctcaaatgcagcaattcagaccgccg
ccaaacatgccgccacctcctccacagtccgctccagctcctccaaggtcgcttccgcca
cctatggcaatgggaaaccaacaacctatgtggcgaccgccccctccccctcagatgagg
ccacccaacatgcaacatgcgtcaatgcccccacctccgcctctcaataaccctctgcca
ccgccccctatgaattga

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