Malus domestica (apple): 103439323
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Entry
103439323 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT3 isoform X2
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103439323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103439323
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103439323
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103439323
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
FAIM1
DUF7567
Motif
Other DBs
NCBI-GeneID:
103439323
NCBI-ProteinID:
XP_028961583
LinkDB
All DBs
Position
07:complement(join(22043136..22043495,22043932..22044318,22045440..22045640))
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AA seq
315 aa
AA seq
DB search
MESDIIESFASLDLIDDDEIHSRPIHQFVSVPKAHSNTGSNIPGTTSVHELLECPVCTNS
MYPPIHQCHNGHTLCSTCKARVHNRCPTCRQELGDIRCLALEKVAESLELPCKYCSLGCP
EIFPYYSKLKHEAVCNFRPYNCPYAGSDCSTVGDIPFLVSHLRDDHKVDMHSGCTFNHRY
VKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMAFLRFMGDEAEARNYSYSL
EVGGNGRKLIWEGNPRSIRDSHKKVRDSHDGLIIQRNMALFFSGGDRKELKLRVTGRILK
EQQNPEGGTCIPLCS
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggaatcagacatcattgaaagttttgcgtctttggatttgattgacgatgacgagatc
catagccgtccgattcaccagtttgtttcagttccgaaggcgcacagcaacaccggcagt
aacattcccggcaccaccagcgtccacgagcttcttgaatgccctgtttgtaccaattca
atgtaccctccaatccatcagtgtcacaatgggcataccctttgttccacctgtaaagca
agggtgcataaccggtgcccaacttgtagacaggagcttggtgacataaggtgtctagca
ctggagaaggttgctgaatcgcttgaactgccctgcaagtattgctctctagggtgccca
gagatatttccctattatagtaaactcaaacacgaggctgtctgtaacttcagaccatac
aactgtccatatgctggatcagactgctccactgttggggatattccattccttgtttct
cacctccgggatgatcacaaggtggacatgcattccggatgcacttttaatcatcgttat
gtaaagtctaatcctcgtgaagtagaaaatgccacatggatgttaactgtcttccactgt
tttggtcagtatttctgtctacattttgaagccttccagcttggtatggctcctgtttac
atggcatttctccggttcatgggggatgaagcagaagctcggaactacagctacagcctg
gaggttggaggaaatggccgaaagctgatttgggagggcaacccaagaagcataagggat
agccacaagaaggttagagacagccatgatggcctcataatacagcgcaacatggcgctt
ttcttctctggtggggataggaaagagctgaagctgcgggtcacaggacgaatattgaag
gaacagcagaacccagaaggtgggacctgcatacctctctgtagctag
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