Malus domestica (apple): 103439324
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Entry
103439324 CDS
T03194
Name
(RefSeq) UV-stimulated scaffold protein A homolog isoform X1
KO
K23720
UV-stimulated scaffold protein A
Organism
mdm
Malus domestica (apple)
Pathway
mdm03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103439324
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103439324
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103439324
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UVSSA_N
DUF2043
DYH2-5-8_CC
Motif
Other DBs
NCBI-GeneID:
103439324
NCBI-ProteinID:
XP_008376092
UniProt:
A0A498JGR9
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Position
07:complement(join(22048414..22050171,22050555..22050734))
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AA seq
645 aa
AA seq
DB search
MEEEEGGKVRVLIETATISTEPDVDPRLLKAIKSVVRYSDSELRLAARILMDLMKREHSQ
VRYLTLLIIDELFMRSKLFRTLVVENLDQLLTLSVGFRIHLSLPPPANVATALRKKAIEF
LEKWNSSFGVHYKQIRLGFDYLKNTLKYQFPNLQETATRLQQERRERERKTRKILLKKFE
ILEKNFVSIKEEIQSTVDEIGECLEIVRPKEEGVPFCPLDEEDIEEFHSYEFRQLRLQAL
EEGEKLHENSENKVVFDALRELYKILVKHLTAVQEWILVLVKVELTDNRSRDSYLKEFID
IRNNIQSVKKKCEESGCNLSNIAKHEEEDFWEEGKIETTEGGNFNLPNNRTGGLAVASTS
KEVQGSIPKRHDKESDANKRLSHEGGGSNSDPLRSKLLAEAPEVNWSNHLASWGSKMDVL
ANHRGLELESHWGRVDQDAVIPAEKIAELNLQATVYKEKQVEIQPCRAPLSNGKLCPRRD
LRICPFHGPVIPRDDEGKPLNQNPPKDEKAPDLGTNLVEQLTKQAVQNVREKDKELARKR
EIDKKALKRAKLAKIREHNEAVLRDSAIASTSKSAFIGEDWEPSTSRNPSFRNKKKTLAS
MLQKKETPKDRLARRILNTRASAATVRQLTLGEDANYREAFPNQW
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaggaaggagggaaggttagggttttgatagagacggcgacgatctcgacc
gaaccggatgtcgacccacgcctcctcaaggccatcaagtcggttgtccgatactccgat
tcggagctccgactcgccgctcgtattctcatggatcttatgaagcgcgaacactctcag
gtgcgctacctcacacttcttatcattgatgagctttttatgagatcaaagctatttaga
acccttgttgtggaaaatttggatcagttattgactttaagtgttggatttagaatacat
ttgtcactcccacctccggcaaatgttgcaactgctctgcgtaagaaggcaatagagttt
ttggagaagtggaattcttcgtttggggttcactataagcagattaggttagggtttgat
taccttaagaacacccttaagtatcagttcccgaatctacaagaaactgcgactcggctt
cagcaggagagaagggaaagggagaggaagacaagaaagatcttgttgaaaaagtttgag
attttggaaaagaattttgtgtcaattaaggaagaaattcaatctaccgttgatgagatt
ggggagtgtttagaaattgtacgccctaaagaggaaggtgtgccgttttgtccattagat
gaggaagatatcgaagagtttcattcttatgagttccggcagttgcgcttacaagcattg
gaagaaggagaaaagcttcatgagaatagtgaaaacaaagtggtttttgatgccctgcgg
gagctttacaagatattggtaaagcatttgactgcagtgcaagaatggatccttgttctt
gtaaaagttgaactgactgataacagatccagggattcatatttgaaggagttcatcgat
atccggaataatattcaatcagtgaagaagaagtgtgaagaatcgggatgcaatctttca
aacattgcaaagcacgaggaagaagatttttgggaggaaggcaagatcgaaacaactgag
ggtgggaattttaatcttcccaataacagaactggaggtctggctgtggcatcaacatcc
aaggaggtgcaaggtagcattcctaaacgccatgataaggagagcgatgccaataagagg
ctcagtcatgaaggtgggggaagcaattcagaccctctgagaagtaagcttctggctgaa
gctcctgaggtgaactggagcaatcatttggccagttggggttcaaagatggatgtattg
gctaaccatcgggggttggagcttgaaagtcattggggcagggtggatcaggatgcagtt
attccagcagaaaagattgcggaattaaatcttcaggctactgtgtacaaagaaaagcag
gttgaaattcagccatgccgagcaccattaagcaatggaaaactttgtccgagaagagac
ttgagaatttgcccatttcatggacctgttattcccagagatgatgagggaaagccactg
aatcagaaccctccaaaagatgagaaagctcctgatttagggaccaatttagtagagcag
ttaacgaaacaagccgtgcagaatgttcgtgagaaagataaagagttggcaaggaagaga
gaaatagataaaaaggcactgaagcgtgccaagcttgccaaaataagagaacacaatgaa
gcggttttacgggattctgcaatcgcttcaacttctaaatctgcatttattggagaagat
tgggagccaagtactagtaggaacccgtcattcagaaacaaaaagaaaacccttgcctcc
atgctgcagaagaaagagacaccaaaagatagattagctcggaggattttgaatacacga
gcaagtgctgcaactgtaagacaacttacattgggcgaggatgcaaattaccgagaagcc
ttcccgaatcagtggtaa
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