KEGG   Malus domestica (apple): 103439344
Entry
103439344         CDS       T03194                                 
Name
(RefSeq) UBP1-associated protein 2A-like
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
mdm  Malus domestica (apple)
Pathway
mdm03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    103439344
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103439344
   03041 Spliceosome [BR:mdm03041]
    103439344
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     103439344
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103439344
Spliceosome [BR:mdm03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    103439344
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 103439344
NCBI-ProteinID: XP_008376121
LinkDB
Position
01:8650010..8651476
AA seq 488 aa
MAKKRKLSSSEPSEPTKKQQQVVVEEPKPQNEPAEEVVEEEEEEVEEEEEEEDEGADEDE
EEEEEDEEGPGGEYKETGNITTTSASAALDQAGAGDDEDEPIQNLLEPFTKEQLISLLLE
AADNHGDVADRIRKVADEDPIHRKIFVHGLGWDTNAETLTGVFKEYGEIEDCKAVCDKVS
GKSKGYGFILFKTRSGARKALKQPQKQIGNRMTACQLAAIGPGPAPNAAAGPVAAPAVQS
QPMSEYTQRKIYVSNVGADLEPQKLLMFFSRFGEIEEGPLGLDKLTGRPKGFCLFVYKSA
ESAKRALEEPHKNFEGHILHCQKAIDGPKPGKSQHQNQHHHKSHNSKFQRNENSGYAGGA
ASGMGHLMAPASGGIGFNQGAAAAQAFNPAIGQALTALLATQGAGLGLTNLLGTFGTAPN
VNPGVPGAGHVMQGGYGNQASISPGMMGSYGNQGAMQGGYPNPQLGQGGSGRGQHGAGQS
GGAPYMGH
NT seq 1467 nt   +upstreamnt  +downstreamnt
atggcgaaaaaacgaaagcttagctcctccgagccctccgaacccaccaaaaagcaacaa
caggtcgtagttgaggaacccaaaccccaaaacgaaccagcagaggaagtagtcgaagag
gaagaagaagaagtcgaagaagaggaggaggaggaagatgaaggagccgacgaagacgaa
gaggaagaggaggaggacgaagaggggccaggcggtgagtataaggaaaccggtaacata
accacgacgtccgcctcagccgctttggatcaggccggtgcaggtgatgacgaggacgag
ccgatccagaatcttctagaaccattcaccaaggaacagcttatctccctgctcctcgaa
gctgccgataaccacggcgacgtggcggatcggatccggaaggttgcggatgaggaccca
atccaccgcaagatcttcgtccatggtctcggatgggacaccaacgccgaaaccctaacc
ggtgtgtttaaggaatacggtgagattgaggattgcaaggctgtttgcgataaggtctct
ggtaagtccaagggttacggtttcattctcttcaagactcgttctggggcccgaaaagcc
ctaaagcagccccagaagcagatcggtaatcggatgactgcatgccagctggcggcgatt
ggccctggcccggctcctaacgccgctgctggacctgtggcagccccggcggttcaatcc
cagccgatgtcggagtacacgcagaggaagatctacgtgagcaatgttggggcggacttg
gagccccagaagcttcttatgttcttttctaggtttggagaaattgaggaagggccacta
ggtcttgataagttgaccgggaggcctaaagggttttgcttgtttgtgtacaagtcggca
gagagtgccaagagggctctggaagagccgcacaagaattttgagggccatattttgcat
tgccagaaggccattgacggtccaaagccgggcaagtctcagcaccagaaccagcaccac
cacaagtcacataattccaagtttcagaggaatgagaattcaggttatgcaggtggagct
gcatcaggaatgggccatttgatggcacctgcaagtggggggattggatttaatcagggg
gctgctgcagcccaggcatttaacccagctattgggcaggcactgactgctttgcttgca
acacagggagctggcttggggctgacaaaccttttggggacttttggaacagctccgaat
gtgaacccaggtgttcctggtgcaggacatgtgatgcagggtggatacgggaatcaggca
agtattagtcctgggatgatgggaagctatggaaatcaaggtgcaatgcaaggtggctat
cctaacccgcagttagggcaaggtggttcaggaagggggcagcatggcgctgggcaatct
ggtggcgctccgtacatggggcattag

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