Malus domestica (apple): 103439360
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Entry
103439360 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103439360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103439360
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103439360
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Motif
Pfam:
Ion_trans
cNMP_binding
IQ
IQ_SCN5A_C
Motif
Other DBs
NCBI-GeneID:
103439360
NCBI-ProteinID:
XP_028961577
LinkDB
All DBs
Position
07:join(21878426..21878488,21878587..21878888,21878966..21879077,21879163..21879399,21879482..21879876,21880038..21880326)
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AA seq
465 aa
AA seq
DB search
MTETAWAGAAVNLLLFMLASHIVGAFWYLLSVEREYRCWRDQCNGNVDCKKFLYCVPNHD
NDASFVAKMNASCPFSDPGNIKNSSAFNFGIYNDALASGVTETKDFPKKFLFCFWWGLRN
LSSLGQNLQTSTYVWEIIFAVAISIFGLVLFSLLIGNMQKYLQSTTVRVEEMRVKRRDAE
QWMSHRMLPEKLRERIRRYDQYKWQETRGVEEDNLVRNLPKDLRKDIKRHLCLALLKRVP
MFEKMDEQLMDAMCDRLKPVLYTDKSFITREGDPVDEMLFIMRGNLATMTTNGGRTGFFN
TADLKAGDFCGEELLTWALVPNSSTNLPTSTRTVEAKTEVEAFALMADDLKFVASQFRRL
HSKQLRHTFRFYSLQWRTRSACFIQAAWRRHWKRKLEKSLREEEDRLQDAGTLPSLLAAV
YASKFAANALRGLRQKVKRDTRPSPTLLPLLHQKPAEPDFTAEHH
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgactgaaacagcgtgggccggggctgctgtcaatcttctgctcttcatgcttgccagt
catatagttggagccttttggtacttgctctccgtggaacgtgagtacaggtgctggcgc
gatcagtgcaatgggaacgttgattgtaagaaattcctgtactgtgttcctaaccatgac
aatgatgcaagctttgttgcaaagatgaacgcttcttgccctttcagtgacccgggcaac
attaaaaattcatcagcgttcaactttggaatatataatgatgctcttgcgtctggtgtg
acggagaccaaagattttccaaagaaattcttgttctgcttctggtggggtctgcgcaac
cttagttcacttggccaaaacctccaaacaagcacatatgtttgggagataatatttgca
gtcgccatatcaatcttcggattagttctgttttcgttgctcattggaaatatgcagaag
tatctgcagtccacaactgtgagggttgaagaaatgagagtgaaaaggcgcgatgcagaa
cagtggatgtcacaccgaatgctcccagagaaattgagggaaaggattcgacggtatgat
cagtacaaatggcaagaaacaagaggtgttgaggaagacaatcttgttcgtaaccttcct
aaagacctacgaaaggacataaagcgccatctttgcttggctcttctcaagagagtgcca
atgttcgaaaaaatggatgaacaactgatggatgccatgtgcgatcgcctcaagccagtt
ctgtatacggacaagagcttcataacccgagaaggtgatccagtagatgagatgctcttt
attatgcgcggaaatttagcaactatgactacgaatggtggaagaacaggcttctttaac
acagctgatcttaaggctggtgacttctgtggagaagagcttcttacatgggccttggtt
ccaaactcctccaccaatctccccacctcaactaggacagtggaagctaaaactgaggtt
gaagcgtttgcgctcatggctgatgatttgaagtttgtcgcctcccagtttcggcgcctg
cacagcaagcagctccgacatactttcaggttctactccctgcagtggagaacacggtca
gcctgtttcatacaagcagcttggcgccggcactggaagagaaagctcgaaaagtcctta
cgcgaagaagaagacaggctgcaagatgcaggaaccttaccaagcctccttgccgctgta
tatgcatcaaagtttgcagccaacgcgctgcgagggttgcgacaaaaggttaagcgcgac
actaggccttcaccgacattgctgccattgctgcatcagaagcccgctgagcccgatttt
actgcagaacatcactag
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