KEGG   Malus domestica (apple): 103439414
Entry
103439414         CDS       T03194                                 
Name
(RefSeq) nibrin homolog
  KO
K10867  nibrin
Organism
mdm  Malus domestica (apple)
Pathway
mdm03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03440 Homologous recombination
    103439414
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mdm03032]
    103439414
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103439414
DNA replication proteins [BR:mdm03032]
 Eukaryotic type
  DNA Replication Termination Factors
   MRN complex
    103439414
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    MRN(MRX) complex
     103439414
    BRCA1-C complex
     103439414
SSDB
Motif
Pfam: FHA BRCT PTCB-BRCT Yop-YscD_cpl
Other DBs
NCBI-GeneID: 103439414
NCBI-ProteinID: XP_008376205
LinkDB
Position
11:join(41301099..41301135,41301950..41302003,41302208..41302472,41302753..41302841,41304474..41304604,41305340..41305386,41305493..41305601,41306793..41306879,41309377..41309542,41310789..41311132,41311597..41311658,41311752..41311853,41311951..41312005)
AA seq 515 aa
MVWGFFPTDPLSGEDKYYIFARGTYKVGRKGCDVNITKDKGVSRVHAEIVVDAMIAPLPL
QTKSSILSSIVRIRDCSKYGTYINKNVTSMEKIHELPNRETTLRQGDLVSFGTGNAIYRF
SFVPLIFFACCSEPTQVNHPLEDKLSSIGAHVTYHLNQECTHVLVDQLMPVKEDIVDAIV
AKKPIVLGSWVEFLAEKNIRNELPGCESFAPTLTVEGVSVKLTDPKTRENCLEGYTFLLD
SKPVYKFMDRLWSLLEVSGAKILSIDGFNLKSQSSLCGENDRVVCVIPERLSDAGLNKLG
SLLRVNEIGLICAILNGRLDTSMLKSPCVVVSSSCSTDETVVADSDAEEMATSVLATSSV
GTKGVVETVPREISMSYAAIKSEDNYVMSFRRSSDMGGKLDESESGIADIIYSQDLIVRN
TSLPCAIVTTANNRVVNFKRFRKTNTRSGNSFSRLIPFLKSPYKDSEYGSEEMVESVKEE
KRRKQMEAISEELFSNEAGRRRRVAGSLRGILTHG
NT seq 1548 nt   +upstreamnt  +downstreamnt
atggtttggggtttcttccctaccgaccctctctcaggtgaagataaatactatatcttt
gcaagggggacgtacaaagtgggtcggaaaggttgtgatgtaaatatcactaaagataaa
ggagtttctcgggttcatgcagaaatagttgttgatgcaatgattgcccctcttcccctg
caaacaaaatcttctatattatcttccatagttcgaattagagattgctcaaaatatgga
acatacattaacaagaacgttacgtcaatggaaaagattcatgagttacccaatagagaa
acaacgttaaggcaaggagacttggtttcatttggaactggcaatgcaatctacagattt
tcctttgttccactcattttctttgcgtgctgctcggaaccaacccaagtgaatcacccc
cttgaagataaactttcatcaattggtgctcatgtcacttatcatctaaatcaggagtgc
acacatgtacttgttgaccaactcatgccagtgaaagaagatatagtagatgctattgtg
gcgaagaaacctattgttcttggtagttgggttgagtttcttgcagaaaaaaacattcgc
aatgagcttcctgggtgtgaatcctttgctccaacactaacagtggaaggagtatcagtc
aaacttacagatccgaaaactcgtgaaaactgtttagaaggatacacatttttgttggac
tccaaacctgtgtataaattcatggatcgcttgtggtccttactggaagtgagtggtgca
aagattctttccattgatgggtttaatttgaagagccaaagctcactttgtggagaaaat
gatcgtgttgtatgtgttatcccagaacgattatcagatgctgggttaaataagcttggt
tcacttttaagagtgaatgagattgggttaatatgtgccattttaaatggacggttggat
acatctatgttaaagtcaccttgcgtagttgtatcatcttcatgctccacagatgaaact
gtggtagctgattctgatgcagaagaaatggccacttcagttctggcaacttcatctgtt
gggaccaaaggagttgttgaaactgtaccccgtgaaatctccatgagttatgcagctatc
aaatctgaggataactatgtcatgagctttagacgaagtagtgacatgggaggcaagctt
gacgagtctgaaagtggaattgcagatattatttatagccaagatttgattgtgcgaaat
acaagcctaccttgtgccattgttactactgcaaacaacagagttgtaaatttcaaacgg
ttcagaaagacaaatactcgatccgggaatagcttcagcagacttattccattcttgaag
tccccatataaggattctgaatatgggagtgaggaaatggtagagtctgtgaaagaagag
aaaaggagaaagcaaatggaagccatttctgaagagttattcagtaatgaagcgggtcgt
cgtcgccgtgtagctggttctcttcgtgggattcttactcatggttaa

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