KEGG   Malus domestica (apple): 103439435
Entry
103439435         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein
  KO
K20178  vacuolar protein sorting-associated protein 8
Organism
mdm  Malus domestica (apple)
Pathway
mdm04148  Efferocytosis
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04148 Efferocytosis
    103439435
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:mdm04131]
    103439435
Membrane trafficking [BR:mdm04131]
 Endosome - Lysosome transport
  Tethering complex
   CORVET complex
    103439435
SSDB
Motif
Pfam: TPR_Vps8 Beta-prop_VPS8 Clathrin TPR_Vps41 VPS8_N TPR_VPS8_2 Beta-prop_WDR36-Utp21_1st Beta-prop_EML Beta-prop_WDR5 Beta-prop_EML_2 Beta-prop_WDR3_1st WD40 WDR55 WD40_CDC20-Fz ANAPC4_WD40 WD40_Gbeta WD40_WDHD1_1st Beta-prop_RIG_2nd Beta-prop_HPS5 WD40_Prp19 Beta-prop_TEP1_2nd DUF7906 Beta-prop_THOC3 Beta-prop_LRRK2 Beta-prop_Aladin zf-RING_2
Other DBs
NCBI-GeneID: 103439435
NCBI-ProteinID: XP_008376221
LinkDB
Position
07:join(23493231..23494658,23494748..23495059,23495186..23495425,23495551..23495677,23495749..23495906,23496061..23496694,23498007..23498071,23498156..23498257,23498358..23498500,23498753..23498808,23499100..23499749,23499835..23500025,23500155..23500446,23500651..23500926,23501038..23501147,23501565..23501898,23502052..23502456,23502568..23502814,23502902..23502927)
AA seq 1931 aa
MTKKLTRFEPQLAMELDLDSFLNSHLSLSDEDDDDDLSSVPHRTIDEILNDTDSSASSSP
PSSTIYRLNSDPKPPEPPNDAVSVPVVKSEDERVVRPRSNLYSRVKSGDLSEDPAGRVPK
PSPWLLGGMRTNAKPGAALAAAAAASRSMPTPHAAAIKSRRSAVSGVIQKVLEGSELDEK
SEVSSNSTGDTTAIRSAVLRTNSNELQVDFGGELLREGGVLESESKLEQTFRVDRSQVDE
ASAGNAVEEEKNVSSFDENLTNLDANDVKDTEFSKNVEVVEEYKQDIQDLDDNSPCSKES
DSEDNDGGGGGKDDGDDGGGKESEDNKGDIGNDSDIGDDDELGSSITQLVEERIGELESR
RISKKSEKKLRKPLEIAEELEKKQASNALHWEEGAAAQPMRLEGVRRGSTTLGYFNVDAN
NPITRTLSSPALRRDHGSPQVLAVHNNYIAIGMGRGSILVIPSKYSAHTADSMDAKMLIL
GLQGERSYAAVTSMCFNQQGDLLLAGYADGHITVWDVQRASAAKIITGEHTAPVVHTLFL
GQDSQVTRQFKAVTGDSKGLVLLHSSSVVPLLNRFSIKTQCLLDGQNTGTVLSASPLLFD
EFCGGASLSSQGSGAVSGSSIGGMMGGVVGGDAGWKLFNEGSSLVEEGVVVFVTHHTVLV
VRLTPTLEVYARLSKPDGVREGSMPCTAWKCTIQSHSSPASSENMPAEAVERVSLLALAW
DRKVLVAKLVKSELKVYGKWSLESAAIGVAWLDDQMLVVLTVTGQLCLFAKDGTVIHQTS
FSVDGFGGDDLIAYHTHFINIFGNPEKAYHNCVAVRGASVYVLGPMHLIVSRLLPWKERI
QVLRGAGDWMGALNMAMTIYDGQAHGVVDLPRTLVAVQETIMSYLVELLLSYVEEVFSYI
SVAFCNQIGKRDQADDVNSKSSSMHSEIKEQYTRVGGVAVEFCVHIKRTDILFDEIFSKF
VAVQQRDTFLELLEPYILKDMLGSLPPEIMQALVEHYSRTGWLQRVEQCVLHMDISSLDF
NQVVRLCREHGLYSALVYLFNKGLDDFRSPLEELLVVLRNSQREGATALGYRMLVYLKYC
FSGLAFPPGQGTIPPSRLPSLRTELLQFLLEGSDAPNSRSVSSVMPGGEYINLYLLLELD
TEATLDVLRCAFVEDEISKSDLSSHDSDMQDGNNLMAQNKNSMVQNTVDTLIRIISKDSS
QTDGSPSNDDTGSVVVWPSKKDIDHLFEFIAYYVACGRATVSKSVLSQILEYLTSDNNFP
PCVSRDSITSKRREKQVLGLLEVVPETDWDSSYVLQLCEKAQFYQVCGLIHTSRHQYLAA
LDCYMKDVEEPIHAFSFINKTLLQLTDKECAAFRSEIISRIPELFYLNREGTFFLVIDHF
TIEEGSHILSKLRSHPKSLFLYLKTVIEVHLSGTLDFSSLRKDDLVRVKDQSKAVEAYLE
RISDFPKLLRSNPVNVTDDMIELYLELLCQYERNSVLKFLETFDSYRVEHCLRLCQKYGI
TDAASFLLERVGDVGSALLLTLSTLSDKFMKLDTAVASLASSNSARTEHFSNALKLEEVN
DINSILHACIGLCQRNTHRLNPDESEALWFRLLDSFCEPLTDSFDAGTVSKGEDVKTTVA
KSLDSEEDEMAFIIKWRISKLHKGFHILRKLFSRFIKEIVEGMIGYVRLPTIMSKLLSDN
GNQEFGDFKFTILGMLSTYGFERRILDTAKSLIEDDTFYTMSILKKGASHGYAPRSQICC
LCDCLLDKNSSSYIRIFNCGHATHLQCEALENGASSSSSSSGCPVCMPKKKSQRSRSKSV
LPEKSLVKEFLSRTQQTHGTTSHPHESSASENTYGLQQISRFDILTNLQRDRGLVEIENM
PQLRLAPPAVYHEKVQKGTVLSPAESSTDLSRVGQQSKTKQLRDLKVRGSSLRLPLKSNI
FGNGKEKTSKR
NT seq 5796 nt   +upstreamnt  +downstreamnt
atgaccaagaagctcactcgcttcgaaccgcaactcgccatggaactcgaccttgactcg
ttcctcaattcgcacctctccctctccgacgaagacgacgacgacgaccttagctccgtc
ccccaccgcacgattgacgaaattctcaacgacaccgattcgtccgcctcatcgtccccg
ccctcctccactatctaccgcctcaattccgatcccaaaccaccggaacctcccaacgac
gccgtatcggtccccgtcgttaagtccgaggatgaaagggtggtccggccgaggtccaat
ctgtacagtcgggtcaagtccggggatttgtcggaggatccggccgggagggttccgaag
ccgtctccatggttgctcggaggcatgagaacgaatgcgaagcccggggcggccctggct
gcggctgcggcggcctcaaggtcgatgccaacgccgcacgccgcggcaatcaagtcgagg
aggagcgccgtgagcggagttatccagaaggttcttgaaggttcagaactggatgaaaaa
tccgaggtgagttccaattctactggtgatacgactgcaattcgttcggcagtgcttagg
acaaattcaaatgaattacaagtggattttgggggtgaattgttgagagaaggcggggtt
ttggagagcgaaagcaagttagagcagacttttcgagttgatcgatctcaagttgatgag
gcgagtgctggtaatgctgtggaagaagagaagaatgtaagtagttttgatgagaatttg
acaaatttagacgcaaatgatgttaaagatacggaatttagtaagaatgttgaggtcgta
gaggaatataaacaagatattcaagacttagatgataacagtccttgttcgaaagagagt
gatagcgaggataatgatggtggcggtggtggcaaggatgatggtgatgatggtggtggt
aaggagtccgaggataacaaaggcgatattggtaacgatagcgatattggtgatgacgat
gaattgggaagttcaatcactcaactcgtggaggagagaattggggaattagagagcagg
aggattagtaaaaaatctgaaaagaagttgcgcaagccacttgaaatcgctgaagagcta
gagaagaagcaagcttctaatgctttgcattgggaagagggtgccgctgctcaacccatg
aggcttgagggtgttcggagaggctccaccacattaggatacttcaatgttgatgctaac
aatcccattactcggaccctttcatctccggcgttaaggcgtgatcatggctcaccgcaa
gtcttggcggttcacaataattacattgcaataggaatgggaagagggtctattcttgtt
attcctagcaagtactctgctcatactgctgacagcatggatgcaaagatgctaattctt
gggttgcaaggagaacggtcttatgctgctgtaacttctatgtgcttcaatcagcaaggg
gacttgctcttagctggttatgctgatggtcacattacagtttgggacgtgcagagggca
tcggctgccaaaataattaccggagaacatacagctccagttgtacatacgttgtttttg
gggcaggattctcaggttacacgtcaatttaaggcagttaccggtgatagtaagggtctg
gtattattacattcttcctcagtggttccccttcttaataggttctcgattaaaacacag
tgccttcttgatggacaaaatacaggcacagtgctgtcagcttcaccactcctgtttgat
gaattctgtggaggggcttcactgtcttctcagggaagtggggcggtttcaggcagcagt
attggtggtatgatggggggtgtggttggtggagatgcaggttggaaactcttcaatgag
ggatcttctttggtcgaagaaggtgtggtcgtgtttgtcacccatcacactgttctggtg
gtaagactaactcccactttggaagtgtatgcacgactttccaaaccagatggggttcgg
gagggttctatgccttgtactgcttggaaatgtacaatacaatcacacagttcacctgct
agtagcgaaaatatgcctgctgaagcagttgaaagagtttcgttacttgcacttgcttgg
gatcgaaaagttctggtggcaaagttggtcaaatcagagctgaaagtatatgggaaatgg
tctcttgaaagtgcagccataggtgtggcttggctagatgatcagatgctggtggttctc
acggtgaccggacaactttgtttgtttgcgaaggatggaactgtgattcaccaaacaagt
ttttctgttgatggttttggaggcgatgatctcattgcttatcatactcacttcattaat
atatttggaaatcctgaaaaagcttatcacaattgtgtagctgtaagaggagcttcagta
tatgtactcggaccgatgcatcttattgtttcccgacttctcccatggaaagaacgaatt
caggttttacggggagcaggtgattggatgggtgccttgaacatggcaatgacaatttat
gatggtcaagctcatggtgttgttgaccttcctagaactctggttgctgtacaggagacc
ataatgtcctacctggttgagttgctattgtcatatgtagaggaagtattttcatatatc
tcagtagcgttctgcaaccaaattggaaaaagggatcaagctgatgacgtaaacagcaaa
agcagttctatgcactctgaaataaaagagcaatacacccgtgttggtggagttgcagtt
gaattctgtgtccatatcaaaaggactgacatactttttgatgaaatattctccaagttc
gtagctgttcaacagagagacacatttttggagctgttggagccttatatattgaaggac
atgcttggttctcttccacctgagattatgcaagcactggtagagcactacagccgcaca
gggtggttacagcgcgttgaacaatgtgtccttcacatggatatttcgtccttggatttc
aatcaggttgttaggttatgcagggagcacgggctgtatagtgctctggtgtatctcttc
aataaaggattggatgatttcaggtcacccttagaggagctgttggtggtcttgcgaaat
agtcaaagagaaggtgctactgcccttggttacaggatgctggtttatttaaagtactgc
ttttcaggccttgcttttccaccaggacagggaacaattcccccctcacgcttgccatct
ctgagaacagaacttctgcaatttttgttggagggttctgatgcccctaattcaagatca
gtctcaagtgtaatgccaggaggagaatatattaacctgtatcttctgttagagctagat
actgaagctactttggacgttctgagatgtgctttcgtggaagatgaaatctcaaaatct
gacctttcttctcatgattcagatatgcaggatgggaacaatttaatggctcaaaataaa
aattcaatggttcagaacacagtagatactcttattcgcattattagtaaggacagttct
caaacagatggatctcctagcaatgatgacactggatcagtagtagtgtggccttcaaag
aaagacatagatcatctatttgagtttattgcatactatgttgcatgtggaagagccact
gtctcgaaaagtgtattgtctcagattttggagtatttgacctcagataataactttcca
ccatgtgtttccagagatagcataacttcaaaaagaagagaaaagcaggttctgggactt
cttgaggtagtgcctgagaccgattgggattcatcttatgtgttacagctatgcgagaaa
gcgcaattttaccaggtttgtggcctaattcatactagcagacatcagtatcttgctgct
ctggattgctacatgaaagatgtagaagaacccattcatgccttctcctttatcaacaaa
acattattacagctgactgacaaggaatgcgctgcttttcgatcagaaattatttctcga
attccagagcttttttacttaaacagagagggcacattcttcttggttatcgatcatttt
actattgaagaaggttctcatatcctctctaaacttcgttcccatccaaaaagtctgttc
ctttacttaaaaacagtgattgaggtccacttatccggcacgctcgacttctcaagttta
agaaaagatgatcttgtgagggttaaggatcaatcgaaagcagttgaggcgtatctggaa
aggatctccgatttcccaaagcttttgcgtagtaatcctgttaatgtgactgatgatatg
attgaactttatctggagctgttatgtcagtacgagcgcaattcagttctcaaattctta
gagacattcgatagctatcgcgtggaacactgtttgcgcctgtgccagaaatatgggata
acagatgctgcttctttcttgttggaaagggttggtgatgtcggcagtgctcttttacta
acactttccaccctcagtgacaaatttatgaagcttgatactgctgtggcaagtctggca
tcaagtaattctgctcgtactgagcatttcagcaatgctttaaaattggaagaggtgaac
gacattaacagcattttgcatgcctgtattgggctgtgccaaaggaacacccatcgctta
aatcctgatgaatcagaggcgctctggtttagattacttgactcgttttgtgagccttta
acagattcatttgatgctggaacggtatctaaaggagaagatgttaaaacgacggtggcc
aagtcgttggactcagaagaggatgagatggcttttataatcaagtggagaatctcaaag
ctccataaaggctttcatatcttaagaaaactgttctctcggttcatcaaggagattgtt
gagggcatgataggatatgttcgccttccgactatcatgtccaaactcctctctgataat
ggcaaccaagaatttggtgattttaaattcacaattttggggatgcttagcacatatggc
ttcgaaagaagaattctggatactgccaagtccctgatagaagatgatacattctacact
atgagcatactcaagaaaggggcctcccatgggtatgcccctcggagtcaaatatgttgt
ttatgtgattgtcttcttgacaagaactcttctagctacattcgcattttcaattgcggt
catgcaacgcatcttcaatgtgaagctttagagaatggcgcatcaagtagtagctcatcc
tctggatgccctgtttgtatgcctaagaagaagtctcagaggtctagaagcaaatcggtc
cttccagagaagagtttggtgaaggagtttttgtcaagaacccaacaaacacacggaaca
acttcccacccacacgaaagcagtgcatcagagaatacgtacgggcttcagcaaatatca
cggtttgatatcttgaccaatttgcaaagagaccgaggattagtcgagattgaaaacatg
cctcaactaaggctcgcacctccggctgtatatcatgagaaggttcagaaaggaactgtt
ctttcaccggcggaaagcagcactgatctttcgagagtagggcaacaaagtaaaaccaag
caactcagggacctaaaagtaagggggtcgtctctccggttacccttaaaatcaaacata
tttggtaatggcaaggagaagaccagcaagcgatga

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