Entry |
|
Name |
|
KO |
|
Organism |
mdm Malus domestica (apple)
|
Pathway |
mdm01110 | Biosynthesis of secondary metabolites |
|
Module |
mdm_M00001 | Glycolysis (Embden-Meyerhof pathway), glucose => pyruvate |
mdm_M00002 | Glycolysis, core module involving three-carbon compounds |
mdm_M00003 | Gluconeogenesis, oxaloacetate => fructose-6P |
|
Brite |
KEGG Orthology (KO) [BR:mdm00001]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
103439550
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103439550
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
103439550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mdm03019]
103439550
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:mdm04147]
103439550
Enzymes [BR:mdm01000]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.11 phosphopyruvate hydratase
103439550
Messenger RNA biogenesis [BR:mdm03019]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
103439550
Exosome [BR:mdm04147]
Exosomal proteins
Proteins found in most exosomes
103439550
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
01:complement(join(28414700..28414780,28414868..28414924,28415111..28415162,28415253..28415341,28415474..28415524,28415623..28415817,28415917..28416060,28416187..28416261,28416347..28416427,28416509..28416610,28416704..28416919,28417053..28417117,28418948..28419011,28419213..28419278))
|
AA seq |
445 aa
MATIKLVKARQIFDSRGNPTVEVDVTLSDGTYARAAVPSGASTGIYEALELRDGGSNYLG
KGVLKAVENVNSIIGPALIGKDPTEQTKIDNYMVQQLDGTVNEWGWCKQKLGANAILAVS
LAVCKAGALVNKIPLYKHIANLAGNKTLVLPVPAFNVINGGSHAGNKLAMQEFMILPVGA
SCFKEAMKMGVEVYHHLKAVIKKKYGQDATNVGDEGGFAPNIQENKEGLELLKTAIAQAG
YTGKVVIGMDVAASEFYDNKDKTYDLNFKEEKNDGSQKISGDSLKNVYKSFVAEYPIVSI
EDPFDQDDWEHYAKMTAEIGEQVQIVGDDLLVTNPKRVKKAINEKSCNALLLKVNQIGSV
TESIEAVKMSKRAGWGVMASHRSGETEDTFIADLAVGLSTGQIKTGAPCRSERLAKYNQL
LRIEEELGSAAIYAGAKFRVPVEPY |
NT seq |
1338 nt +upstreamnt +downstreamnt
atggccacgatcaagcttgttaaagcccgtcaaatcttcgacagccgtgggaatcccacc
gtcgaagttgatgttacactgtcggatggaacctacgcaagagctgctgttccaagtggg
gcttccacaggtatctatgaagcccttgaactgagagatggcggatcgaattatcttgga
aagggtgtcctcaaggctgtggagaatgtgaattcgatcattggaccagctttgattgga
aaggacccaacagagcagaccaaaatcgacaattatatggtacagcaactcgatggaact
gttaacgaatggggttggtgcaaacagaagctcggagcaaatgctatattggcggtgtct
ctagctgtttgcaaagccggtgcccttgtgaacaagatccctctttacaagcatatagcc
aatcttgctggaaacaagaccttggtgctgcccgtacctgcgtttaatgtcattaacgga
ggttctcatgcaggcaataaactagcaatgcaggaattcatgatcctccctgttggggca
tcttgtttcaaggaagcgatgaagatgggtgtggaagtatatcatcacctgaaggctgta
attaagaagaagtacggacaagatgccacgaatgttggggatgaaggtggctttgcaccc
aatattcaggaaaacaaagagggtcttgaactgctaaagacggccatagctcaagctgga
tatactggaaaggttgtcattggaatggatgttgctgcctcagaattctacgataacaag
gataagacctatgacttgaacttcaaggaagagaaaaatgatggatcacaaaagatatct
ggagacagtctgaagaatgtttacaagtcatttgttgctgagtatccaattgtgtcaatt
gaagatccgtttgaccaggatgattgggaacactatgcaaagatgactgctgaaattggt
gagcaagtccaaattgtcggcgatgatcttctcgtcacaaatccaaagcgagtaaagaaa
gcaatcaatgagaagtcctgcaatgcccttcttttgaaggtgaatcaaattggttcggtt
accgaaagtattgaagctgtgaaaatgtcaaagcgggctggctggggtgtcatggcaagt
caccgaagcggtgaaactgaggatactttcattgccgaccttgctgttgggctgtcaacg
ggacagattaagaccggagctccgtgcagatcagagcggcttgctaaatacaaccagctt
cttaggatcgaggaggagcttggatccgcagcaatctatgccggtgcaaaattcagggtc
ccagtggaaccgtactga |