Malus domestica (apple): 103439557
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Entry
103439557 CDS
T03194
Name
(RefSeq) autophagy-related protein 18C-like isoform X1
KO
K22991
WD repeat-containing protein 45
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mdm04131
]
103439557
Membrane trafficking [BR:
mdm04131
]
Autophagy
Other autophagy associated proteins
Others
103439557
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PROPPIN
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
Beta-prop_WDR90_POC16_2nd
WD40
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_Vps41
ANAPC4_WD40
EIF3I
BCAS3_WD40
Beta-prop_EML
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
Beta-prop_IFT122_1st
Motif
Other DBs
NCBI-GeneID:
103439557
NCBI-ProteinID:
XP_008376336
LinkDB
All DBs
Position
07:join(31354751..31355506,31355762..31356017,31356192..31356315,31356586..31356682)
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AA seq
410 aa
AA seq
DB search
MSSTVSTSRGMHSPARLGMHESPDSGASGSYSPLEPDVNDSETDLLSVSWNQDYGCFSAG
TSNGFRIYNCEPFKETFRRDLKSGGFKIVEMLFRCNILVLVGSGDNSQYPPNKVMIWDDH
QSRCIGEFSFRSEVRAVKLRRDRIVVVLEHKIYGYNFMDLKLLHQIETVANPRGLCSLSH
HPNTSVLACPGLQRGQVRIEHFGLNLTKLINAHDSHIACLTLTMDGLLLATASNKGTLIR
IFNTMDGTRLQEVRRGVDRAEIYSIALSPNVQWLAASSDKGTVHIFSLRVRVFGEVLSAH
NSAQGAAMFQQNSSNSLDPLISPSTGANSSSSLSFMGGVLPKYFSSERSFARFHLPEDTQ
FITAFGSQNTVIIVGMDGSFYKCSFDPVNGGEMVQQEYVRFLKTESRRPS
NT seq
1233 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaacagtgtcaacatctcgaggaatgcattcacccgcaaggcttggcatgcat
gaatcaccggattctggggcttctggttcttacagcccgctcgaaccagatgtcaatgac
agtgaaacggatttgctctctgtatcgtggaatcaggactacggttgcttttctgcaggc
acaagcaatggttttcgaatctacaactgcgagcctttcaaagaaacttttagacgtgat
ttgaaaagtgggggattcaaaattgtggagatgctattccgatgcaacattcttgtactt
gttggtagcggggacaattcacaatatccgcctaacaaggttatgatttgggatgatcat
cagagtcgatgtattggtgaattttcattcagatctgaggttcgtgctgtaaagttaagg
cgtgatcgcatagttgtggttcttgagcacaaaatatatggttacaactttatggatctg
aagctgctgcatcagattgagactgtagcaaatcctaggggattgtgcagcctttcacac
catccaaatacatctgtgctggcttgcccgggccttcaacgaggacaagttcgaattgaa
cattttgggctgaacttgacgaagttaatcaatgctcatgattctcatattgcatgcttg
accttaacaatggacgggctgcttcttgcaactgctagtaataagggtactttgataaga
atcttcaacacaatggatgggactcgcttgcaagaggtacgcagaggagtggacagagca
gaaatttacagtattgctctttctccaaatgttcagtggttggcagcatcgagtgataaa
ggcactgtgcatatattcagcctcagagttagagtattcggggaggttctttctgctcat
aattctgctcaaggggcagcaatgtttcagcagaactcttcaaattccctggatcctctt
atttctccaagcaccggtgccaattctagttcatcattgtctttcatgggaggggtttta
cctaaatattttagctcagaacggtcatttgctcggttccacttgccagaagacactcaa
ttcattactgcatttggttctcaaaacactgtcatcattgttggcatggatgggagtttc
tacaagtgcagttttgatccagtaaatggaggtgagatggtgcagcaggaatacgtacgc
tttctgaaaaccgaaagcaggcggccaagttag
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