KEGG   Malus domestica (apple): 103439624
Entry
103439624         CDS       T03194                                 
Name
(RefSeq) structural maintenance of chromosomes protein 6B-like
  KO
K22804  structural maintenance of chromosomes protein 6
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103439624
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    SMC5-SMC6 complex
     103439624
SSDB
Motif
Pfam: SMC_N AAA_23 AAA_15 EzrA AAA_29 DUF3450 Com_YlbF SbcC_Walker_B Sipho_Gp157 AAA_21 Med9 LRAT ABC_tran AAA_13
Other DBs
NCBI-GeneID: 103439624
NCBI-ProteinID: XP_008376410
LinkDB
Position
07:join(32365505..32365646,32365820..32365925,32366354..32366487,32367213..32367268,32367560..32367646,32367723..32368043,32368246..32368365,32368914..32369048,32369809..32369885,32369977..32370052,32370215..32370289,32370475..32370579,32370827..32370996,32371084..32371186,32371299..32371411,32371705..32371909,32372113..32372238,32372341..32372455,32372544..32372629,32372740..32372835,32373346..32373482,32373577..32373679,32374163..32374242,32374326..32374404,32374495..32374552,32374694..32374791,32374910..32375004,32375165..32375222)
AA seq 1051 aa
MGDPISGLRQRSGSGIVQRVRLENFMCHSSLQIELGDWVNFITGQNGSGKSAILTALCVA
FGSRAKGTQRASTLKDFIKTGCSNAVVQVELKNQGEDAFKPEIYGDIITVERRISGTTSA
TVLKDKQGRRVAARKEDLRELVEHFNIDVENPCVVMSQDKSREFLHSGNDKDKFKFFYKA
TLLQQVEDLLQNIEKQLEKAGVVVDELEGSIRPIERELNELQEKIKSMEHVEEISQKAKQ
LKKKLAWSWVYDVDKQLQEQNLRIVKLKDRVPRCQAKIDEKIGQVVKLRECFTLKKSEID
QMMAKTSEIRRMKDELQQTLTLATKEKIGIGEEYSRKANHIQKLMNAVRSLQQQIEDTQE
QHAKHTQAEESAIEEKLKELQNEVSTVESMLTRLKEEESALSECIQQINNEIREINQMIQ
NIDKNRREISSVIRELRQNQTNKVTAFGGQQVIYLLQSIERHHQRFTSPPIGPIGAHLTL
NNGDVWGPAVEHAIGRLLNAFIVTNHKDSLLLRACAKEAKYNNVQIIIYDFSLPRLHIPP
HMLPQTEHPTTLSRVHSENHTVLNVLVDRGDIERQVLVRDYDVGKTVAFDQRISNLKEVV
TLDGSRMFSRGSVQTVLPPNKRVRTGRLCSSYDDQISDLERQAKSVEEEDKQCMRRKRNA
EQNLQDLQEKLRNVKRRRAHADRDLASKRIALQDSAYAAEASTSPASTVDELHQEISKMQ
EEIQEKKMLLQKFRERTDEAEAKTHDLKVSYEKLCESAKGDIDAFEKAERELMETEENLA
SAEDEKAHYEGVMRNKVLRDIQEAEKEFQQLEHHREENCRKASILCPESEIIAMGDWDGS
TPEQLSALLTRLNQRLERESQRFTESIDDLRLSYKKKERKILERQKKYRAYREKLHACQK
ALNLRRSKFERNANLLKRQLTWHFNTHLGRKGMSGKIKIDDRERTLAIEVKMPQDASSST
VRDTRGLSGGERSFSTLCFTLSLHEMTEAPFRAMDEFDVFMDAVSRKISLDTLVDFALVQ
GSQWILITPHDISMVKNGERIKKQQMAAPRS
NT seq 3156 nt   +upstreamnt  +downstreamnt
atgggtgaccctatctccggcctccgccagcgttccgggtccggcatcgtccagagagtc
agattggagaacttcatgtgccacagtagcttgcagattgagctcggcgactgggtcaat
ttcatcaccggccaaaatggaagtggtaaaagtgcaatactgacagctctgtgtgtggcc
tttgggtctcgagctaaaggcactcaaagggcgtcgacattgaaggatttcataaaaact
ggttgcagtaatgctgttgtccaagtggaactcaaaaatcaaggggaggatgcttttaag
cctgaaatatatggggacatcataacggtagagcgcaggatttctggaaccacaagcgcc
actgttttgaaggataaacaaggaagaagggttgctgctcgaaaagaggatcttcgagag
ctagtagaacattttaatattgatgtggagaatccttgtgttgtcatgagtcaagacaaa
agcagagagtttttgcattctgggaatgacaaagataaattcaagttcttttacaaggcc
acacttcttcagcaagttgaagatcttttgcaaaacattgaaaaacagttggagaaggca
ggtgttgttgttgatgaattagagggctcaataagacctattgaaagggaacttaatgag
ttgcaagaaaagattaaaagcatggagcatgttgaagaaatatctcaaaaagcaaaacag
ttaaaaaagaagcttgcttggtcatgggtatatgatgtggacaagcaactccaggaacag
aatttgagaattgtcaagctgaaagatcgtgtgcctcgatgtcaagctaaaattgatgaa
aaaataggtcaagtggtgaaactgagagaatgcttcaccttgaagaaatctgaaattgat
cagatgatggcaaagacatcagaaattaggagaatgaaggacgaattacagcagacacta
acattggccacgaaagagaagattgggattggagaagaatatagccgcaaagctaaccat
atccagaagttgatgaatgctgttaggtctcttcagcaacagattgaggatacacaggag
caacatgccaaacatacacaggcagaagaatctgcaatagaggaaaagctgaaagaactc
caaaatgaggtttctactgttgaatcaatgcttaccaggttgaaggaagaggagagtgcc
ttatcagaatgcatacaacagataaataatgaaatcagagagataaatcaaatgattcaa
aatattgacaagaatcgccgagagatctcaagtgttattcgtgagcttcgtcaaaaccaa
accaacaaggtgacagcatttggtggacagcaggtgatatacctcctacaatcgattgag
agacatcatcaaagattcacaagtcctcctattggtccaattggtgcccacctgactttg
aataatggagatgtctggggccctgctgttgaacatgccattggaaggttgctcaatgct
ttcattgtaacgaatcataaagactctcttcttctgagagcatgtgcaaaagaagcgaag
tacaacaacgttcagattatcatatatgacttttcattaccaaggttgcatatacctcct
cacatgcttccacaaacagagcacccaactactctttcccgtgttcattctgaaaatcat
actgttctaaatgttttggtagataggggagatattgaaaggcaagttcttgtacgagat
tatgacgtgggaaaaacagttgcttttgaccagaggatctcaaatttaaaggaggttgtc
actttagatggtagtaggatgttttctcgtggctctgtccagacagtactccctcccaat
aagagagttagaactggtcgtctttgtagttcttacgatgatcaaattagtgatcttgaa
aggcaagcgaaaagtgtagaagaagaagataagcagtgcatgaggagaaaaagaaatgca
gagcaaaaccttcaggatcttcaagagaagctccgaaatgtgaagaggaggcgtgcgcat
gcggaccgtgatttggcatctaagagaatagcgcttcaagacagtgcgtatgctgccgaa
gctagtacatcacctgcatcaactgttgatgagcttcaccaagaaatctcaaaaatgcaa
gaggagattcaagaaaagaaaatgttgctgcaaaagtttcgagagagaactgatgaagct
gaagcaaagacccatgatcttaaagtatcatatgagaaactatgtgagtcagcaaaagga
gatattgatgcctttgagaaagcagagagagaactgatggagactgaagaaaatctggct
tctgcagaagatgagaaagctcattatgaaggtgtaatgaggaacaaggtacttcgcgat
atccaagaagcagaaaaagaatttcagcagcttgagcatcatcgtgaggagaattgtaga
aaggcttctatcctttgtcctgagagtgaaattatagctatgggtgattgggatggtagc
accccggaacagctcagtgccctattaaccaggctgaatcagaggcttgagcgagagagc
cagagattcactgaatccattgatgaccttcgattgtcatataagaaaaaagaacgtaag
atattagaaagacagaaaaagtacagagcttaccgagaaaagttacatgcatgccagaaa
gccctaaatttgcgacgtagcaagtttgaaagaaacgcaaatcttttaaagcgccagttg
acatggcattttaatacccatctgggaaggaaagggatgagtgggaaaattaagatagat
gacagggagaggacccttgctattgaggtaaagatgccccaggatgcatcaagcagcact
gttcgcgacactagagggctttcaggtggagagcgctccttttcaacattgtgctttaca
ttgtctcttcatgaaatgacggaagccccgtttagagcaatggacgagtttgatgttttc
atggatgccgtaagccggaaaatcagcctagacactcttgtcgattttgcattggtgcaa
ggatcccaatggatactcatcacccctcacgatatcagtatggtgaagaacggggagagg
ataaagaagcagcaaatggcagctcctcgctcttga

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