| Entry |
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| Name |
(RefSeq) E3 ubiquitin protein ligase RIN2 isoform X2
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| KO |
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| Organism |
mdm Malus domestica (apple)
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| Pathway |
| mdm04141 | Protein processing in endoplasmic reticulum |
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| Brite |
KEGG Orthology (KO) [BR:mdm00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103439637
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:mdm04121]
103439637
Enzymes [BR:mdm01000]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103439637
Ubiquitin system [BR:mdm04121]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103439637
Multi subunit type E3
ERAD complex
103439637
LMBR1L-GP78-UBAC2 complex
103439637
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
07:join(32465441..32465680,32466040..32466117,32466293..32466379,32466478..32466599,32467033..32467129,32467233..32467338,32467523..32467680,32467791..32467928,32468010..32468077,32468184..32468414,32469052..32469433,32469525..32469581)
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| AA seq |
587 aa
MGLRYIAISAACTAISFAGLQLWTETSLVKLKSDGLIAENLINAANFGHVFDLLLGSYTT
VGLLANFVLNAFILLVLCLKTIFFVELYSSETHKLIERLINYVIYKGTFLPLVIPPTIYH
AGLWSVWLIVLCSLKMFQALARDRLERLNASPSATPLTYFRVYSVLLLVLTVDIFWIRLC
VVIYKTLGLSMFLLLLFEPFSIAFETLQAILVHGFQLLDIWIHHSAWNSSNCESSKLFDT
SAVGLLLEWKGGLTRNLSFVLDMATLLMALGHYVHIWWFHGMAFHLVDAILFLNIRALLS
SIVKRIKGFIKLKKALGALHAALPDATSEELRAYDDECAICREPMAKAKRLHCSHLFHLA
CLRSWLDQGLNEIYSCPTCRKPLFVGRPENEVHPRSEETSSDEQLARQISLGLGRQNTPG
HAIPAGVFPNQTQNPAEGDPWRGTGLDSDWLHTWSSQGVDGAGPSTAVGSVGLGRVQMMM
RRLASVGETYAHTALEDGAWSLWPMNAPQVAATGPPIPPADDGRYQGGARNLHMRTPART
VNDNLANILAMAETVREVLPHMSDDLIFQDLQRTNSVTVTVNNLLQM |
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| NT seq |
1764 nt +upstreamnt +downstreamnt
atgggtttgaggtatatagccatctccgctgcatgtacagcgataagctttgcaggcctc
cagttgtggacggaaacttctttagttaaactaaaatcggatggactaattgcggagaat
ttgattaatgctgccaattttggccatgtatttgatctgcttttgggttcttatactacc
gttggactgctggcaaattttgtactcaatgcatttattttactcgttttatgtctcaag
actatattctttgtggagttgtattcttctgaaactcacaaattaatcgaacgccttatc
aattatgttatttacaagggcacttttctacccctggtcattcctcctacaatatatcat
gcgggcctgtggtcagtctggttgattgttctttgttctttaaagatgtttcaagctttg
gctcgagatcgacttgaacggttgaatgcatccccttctgccacaccattgacatatttt
cgtgtgtattcagtgttattgctggtgctgactgttgatattttctggataaggctgtgt
gtggtgatatataaaacactgggtttatctatgtttctcttgttattatttgagcctttc
agtattgcatttgagacattgcaggctattttggtgcatggatttcagttacttgatata
tggatccatcattcagcatggaacagttcaaattgcgagagttccaaattatttgataca
tcagcagttggtttattgttggaatggaaaggcggtcttactcggaatttgagctttgtt
cttgatatggccacattgttaatggcccttggtcactacgtgcatatttggtggtttcat
ggcatggcattccatctggtggatgcaatcctttttctaaacatacgtgccttgctaagt
tcaattgtaaaacgtataaaagggttcatcaaactgaagaaagccttaggtgctcttcat
gcagcacttccagatgcaacatctgaagaactacgggcatatgatgatgaatgtgcaatt
tgtagggaacctatggctaaggccaaaagactacactgcagtcacctttttcatcttgca
tgcttgagatcttggttggatcaaggtttgaatgagatctattcatgtccgacttgtcgc
aagccactttttgtaggtagacctgaaaatgaagtacatccccgcagtgaagaaacttcg
agtgatgagcagcttgctcgtcaaataagtttaggacttggtcgacaaaatactcctgga
catgcaatacctgctggtgtgtttcccaatcagactcagaaccctgcggaaggcgatcca
tggagaggtaccggactggattcagattggttgcatacttggtcaagccagggagttgac
ggggcaggtccttctacggctgtaggatctgttggactggggagagttcagatgatgatg
aggcgtcttgcatctgtaggggagacgtatgcgcacacggcccttgaagatggtgcgtgg
agcctctggcctatgaatgcccctcaggttgctgcaactggtccaccgattcctcctgca
gacgatggaagataccaaggaggagcacggaatttacatatgaggacccccgcacgtact
gtgaatgacaacctagcaaacatacttgctatggctgagacggtgagggaagttctgcct
catatgtcagatgacctaattttccaggatttgcagcgaacaaattcagttaccgttact
gtgaataatcttctccaaatgtga |
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