KEGG T03194: 103439691

Malus domestica (apple): 103439691

Entry

103439691         CDS       T03194

Name

(RefSeq) DEAD-box ATP-dependent RNA helicase 7

K16911

ATP-dependent RNA helicase DDX21 [EC:5.6.2.7]

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103439691
   03036 Chromosome and associated proteins [BR:mdm03036]
    103439691
Enzymes [BR:mdm01000]
5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     103439691
Ribosome biogenesis [BR:mdm03009]
Eukaryotic type
  Pre-60S particles
   Helicases
    103439691
Chromosome and associated proteins [BR:mdm03036]
Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    103439691

SSDB

Motif

Pfam:

DEAD GUCT Helicase_C DD_DDX21-DDX50 ResIII FlpD CMS1

Other DBs

NCBI-GeneID:

103439691

NCBI-ProteinID:

XP_008376504

LinkDB

Position

01:join(28578644..28579123,28579304..28579438,28579522..28579662,28579762..28579873,28580035..28580105,28580242..28580396,28580507..28580618,28580784..28580885,28580962..28581022,28581126..28581294,28581395..28581491,28581580..28581674,28581954..28582087,28582231..28582427)

AA seq 686 aa
MPSIEVSDYLLAGTTPKDKKEKKMKKLISETLDAAADSPATEKKSKKESKHKKRKASDDE
DRSETSSEMGEPVNVKPPKSEEKSKKKSKKAKVEPEEEDEEKTEEMVKEDPNAVSKFRIS
VPLRAKLKENGIESLFPIQAMTFDTILDGLDLVGRARTGQGKTLAFVLPVLESLTNGPAR
EFRKTGYGRPPTVIVLLPTRELAKQVFADFEAYGGAVGLAACCVYGGSPYGAQESKLRRG
VDVVIGTPGRIKDHIERGNIDLSTLKVRILDEADEMLRMGFVDDVELILGKVKDVSKVQT
LLFSATLPSWVKGISSRFLKPDKKTVDLVGNEKMKASTNVRHIVLPCSSSARSELIPDII
RCYSSGGRTIIFTETKEAASGLAEALPGARALHGDIQQGQREVTLAGFRSGKFMTLVATN
VAARGLDINDVQLIIQCEPPRDVEDYIHRSGRTGRAGNSGVAVMLYDPRRSNFSKIERES
GVKFEHISAPQPLDIAKAVGQDAAEMITKISDSVIPAFKSVAEELLNTSGLSAVDLLAKA
LAKAAGYTEIKKRSLLSSMENHVTILLEAGKPIYSPSFAFGVLRRFLPEEKVESVKGMAL
TADGNGAVFDVAAEDLDLFLAGQENAANVSIEVLKSLPDLQEKESRNSRFGGGGRFGRSG
GGGGFRNDRSSNNRSGGGGRGRGNRW

NT seq 2061 nt +upstreamnt +downstreamnt
atgccttcgatagaagtctccgattatctactcgcgggaaccactccgaaggacaagaag
gagaagaagatgaagaaattgataagcgaaaccctagacgccgcggccgactcgccagct
actgagaagaagtcgaagaaggagtctaagcacaaaaagcggaaggcttcggatgacgag
gacaggagcgagaccagctccgagatgggcgagcccgtgaatgtgaagcctccgaagagc
gaggagaagagcaagaagaagtcaaagaaggcgaaggtggagccggaggaggaggacgag
gagaagaccgaggagatggttaaagaggatcctaacgcggtgtctaagtttcggatttcg
gtgcccttgagggccaaattgaaggagaatgggatcgaatccttgttccctattcaggcc
atgacattcgataccattttggatggtttggatttggtcggccgggctcgaacagggcag
ggtaaaactctagctttcgtgttgcccgttttggagtctttgacaaatgggcctgcaaga
gaatttagaaagactggttatggtagacctccaactgttatcgtgcttttacccaccagg
gaacttgccaaacaggttttcgccgattttgaagcttatggtggtgctgtggggctagca
gcgtgttgtgtatatggtggatctccctacggggctcaagaaagtaagctaaggagaggg
gtggatgttgttattggaacacctggccgcataaaggatcatatagagaggggcaatatc
gacttgagtaccttgaaggttaggatccttgatgaagctgatgaaatgctgaggatgggc
tttgttgatgatgttgaactcattctaggcaaggtgaaggatgtaagtaaagttcaaacg
cttctcttcagtgcaaccttgccaagttgggtgaaaggcatttcttctaggtttctcaaa
ccagataagaaaactgtagatcttgttggtaatgaaaaaatgaaggccagcaccaatgtt
aggcatattgttcttccttgctccagttcagcaagatcagaacttattcctgatatcata
cgttgttacagcagtggaggccgcacaatcattttcaccgagacaaaggaagctgcttct
ggacttgctgaggcgctgcctggagcccgagctttgcatggggacatacagcagggccaa
cgtgaggtcacacttgccggtttcaggtctggcaagtttatgacattagtagccacgaat
gtggcagcgcgtggactggatatcaatgatgttcaattaattattcagtgtgaaccccca
cgtgatgtagaagactatattcatcgatctggacgcacagggagagcaggcaattctgga
gttgcagtcatgctttatgatcccagaaggtcaaatttttcaaaaatcgagagagagtcg
ggagtgaaatttgaacacatatctgctcctcagccacttgatattgccaaagcagttggt
caagatgcagcagaaatgataaccaaaatctctgacagtgtaattcctgctttcaaatct
gttgccgaggagctacttaacacctctggcctatctgcagtagatctactggcaaaagca
cttgctaaagctgctggctacaccgagataaagaagaggtcacttcttagctctatggaa
aaccatgtcacaatacttctcgaggctggaaagcccatttattcaccgtcttttgctttt
ggggtcttgaggagattcttgccagaggagaaggttgagtcagtgaagggtatggcgcta
acagctgatggaaatggtgcagtgtttgatgtagcagctgaagatttggatttgtttctt
gctggtcaggaaaatgcagctaatgtgagcatagaggtgttgaaatcactgcctgattta
caagaaaaagaatcaaggaattcaagatttggcggtggtggaaggtttggccgtagtggt
ggaggtggaggttttcgaaatgataggtcttccaacaaccgatccggtggtggtgggaga
ggtcgcggcaacagatggtga

DBGET integrated database retrieval system