Malus domestica (apple): 103439848
Help
Entry
103439848 CDS
T03194
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
mdm
Malus domestica (apple)
Pathway
mdm04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
103439848
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mdm03000
]
103439848
Transcription factors [BR:
mdm03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
103439848
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
103439848
NCBI-ProteinID:
XP_008376691
LinkDB
All DBs
Position
07:join(35014185..35014667,35015067..35015714,35016405..35016470)
Genome browser
AA seq
398 aa
AA seq
DB search
MAMEDHDRSSDFLEEHEQYCYSDTNCNLGTPGDDLFSILQSLDDHGFGGGGGGVVDFPSP
LASAPFDDDQLLAVFSSSPKDLSSSADKTEFDETNSPPKTKRLKLSSAATPTATATTTTT
NSSDQDGGRMSHITVERNRRKQMNDHLTVLRSLMPCFYVKRGDQASIIGGVVDYINELQQ
VLQSLEAKKQRKAYSCEVLSSPRLQQVSSPRPPGPSPPVLSPRKPPLSPRLGGSSLPPIS
PRTPQPTSPYKSTAARTILQQPQILPAAANIISNYLISNPTMAASSSLEPSPTSSSATSS
INNSVDNLNELFANSKSAIADVEVKFSGPNVLLKTVSPPIPGQALKIISALEDLSLEILH
VSVTTVDETMLNSFTIKIGIECQLSAEELAHQIQQTFC
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggccatggaagatcacgaccgttcatctgattttctcgaagaacatgagcagtactgc
tacagcgataccaattgtaacttgggaactccgggggatgatctttttagcatattacag
agcttagatgatcatgggtttggaggaggaggcggcggagtcgtagactttccttccccg
ttagcttcagcaccattcgatgatgaccaactacttgctgtttttagctcatcaccaaaa
gacctctcctcctcagctgataaaaccgagtttgatgaaactaactctccacccaaaacc
aagagactcaagctctcatcagctgccacccccaccgccactgccaccacaacaaccaca
aattcttcagatcaggatggagggcggatgtctcatataacggtggagcgcaaccgcaga
aagcaaatgaacgaccacttgactgtcttgcgctctcttatgccttgtttctatgttaaa
cgaggagatcaagcatcaatcattggaggggtggttgattacatcaatgagctgcagcaa
gttcttcaatcacttgaagccaaaaagcaacgaaaagcatacagctgtgaagtgttaagc
agccctaggttgcagcaggtttcaagtccaaggccacctggtccctcaccaccagttctc
agccctagaaagccacctctcagccctaggctcggcggcagcagcttaccacccatcagc
ccaagaactccacaacccaccagcccttataagtccacggcagccaggacaatattgcaa
caaccacaaatattacctgcagctgctaatattattagtaattatctgatttctaatcca
acaatggctgctagctcatcacttgagccatcccctacttcttcaagtgctacttcctct
attaataatagtgtcgacaatctgaacgagctttttgccaactccaagtccgccattgcg
gacgtggaggtgaaattttccggtccaaatgttcttttgaaaacagtgtctcctccgata
cccggacaggctctcaaaatcatttccgctcttgaagacctttcgcttgaaattctccat
gtcagtgtcaccaccgttgacgaaaccatgcttaattccttcaccatcaagattggaatt
gaatgccaacttagtgccgaggaactcgctcaccaaatccagcaaacattctgctaa
DBGET
integrated database retrieval system
