Malus domestica (apple): 103439850
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Entry
103439850 CDS
T03194
Name
(RefSeq) RNA polymerase sigma factor SigE, chloroplastic/mitochondrial
KO
K03093
RNA polymerase sigma-I factor
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103439850
Transcription machinery [BR:
mdm03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
103439850
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
GerE
Response_reg_2
Motif
Other DBs
NCBI-GeneID:
103439850
NCBI-ProteinID:
XP_008376694
LinkDB
All DBs
Position
07:join(35032563..35033276,35033406..35033552,35033651..35033887,35034191..35034454,35034662..35034859)
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AA seq
519 aa
AA seq
DB search
MGVVTVSTSAARTPLGLSAKSTSQRSTFRKPLIVAFKTDESNKTALVAPQGKIPLPIETR
KKHQKRIGKARKLAKSVKSTATDVAAPCTTLEVDYNEAAAKLENLYKRSPEIEADVDVED
ADGLMRRGRKRRKKTSESNHEKEEKRTSDIVVRSKTKKAKRLNLDKRVSLKWNKDEKVVS
SVQKRKDQKNEMEKIEELVREYSASTDLVSLDWKKMKIPPVLTSSEHAWLFKLMQPMKGL
HEAREQLQKDLGTEPTNGELAEATNMSVVQVKKHFEVGRAARNKLIKHNLRLVLFVINKY
FQDFANGPKFQDLCQAGVRGLITAIDRFEPKRSFRLSTYGLFWIRHAIIRSMTVSSFTRV
SFGLESVRAEIQKAKLEMIFSLKRIPTDEEIIEKVGISPERYHEVMRASKPVSSLHSRHA
TTQEEYINGITDVDGVEGDNRRKPALLRLAIDDVLDSLKPKESLVIRQRYGLDGKGDRTL
GEIAGNLNISREMVRKHEVKALMKLKHPARVDYLRRYIV
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atgggagttgtgacagtttcgacctcagcggcaaggactccgttaggattgagcgcaaaa
tcaacaagccagagatctacattcagaaagccgttgatagttgcatttaaaacagatgaa
tccaataagacggcattggttgcaccccaggggaaaatacctttgcctatagaaacacga
aagaagcaccaaaagagaatagggaaagctagaaaactcgcaaaaagtgtgaaatctact
gctactgatgtagctgctccgtgtactactttggaagtggattacaatgaagccgctgcc
aagctggaaaacttgtacaagcgtagccccgagattgaagctgatgtggatgtggaagat
gcagatggcttgatgaggaggggtcgcaaaaggaggaagaagactagcgaaagcaatcat
gagaaagaagagaagagaacaagtgatattgtggttagaagcaagacaaagaaggcgaaa
agattgaatcttgataaaagggtttcattgaaatggaacaaggacgagaaagtggtttct
tcagttcaaaagaggaaagatcaaaagaacgaaatggagaagattgaggagctggttagg
gagtattcggcttcaactgatctggtcagtttggactggaaaaagatgaagattcctccg
gttctcacttcttcagaacatgcttggttgttcaagctaatgcaacctatgaagggtctc
catgaagcgagagagcaattacaaaaagatttggggacagaaccaaccaacggcgaattg
gctgaggcgacaaacatgagtgtggttcaagtgaaaaaacatttcgaagttggtcgagct
gcacgaaacaagctcatcaagcacaatctccgacttgtgttattcgtcattaataaatat
tttcaagactttgcaaatggtccaaaatttcaagacctctgccaggcaggagtaaggggg
cttattacggcaattgatcgctttgaaccaaaaagaagttttcggctttccacatatggt
ctgttctggatcaggcatgccatcatacgttccatgacagtctcaagctttactcgtgtt
tcatttggccttgagtcggttagggcggaaattcaaaaggccaagcttgagatgatattt
tcgctcaaaaggattccaactgacgaagagataatcgaaaaagttggaatttctccagag
aggtaccatgaagtaatgagggcctcaaaacctgtttcctctcttcattcaaggcatgca
accacacaagaggagtatatcaacggtattactgacgtcgatggtgttgaaggtgataac
cggcggaaacctgctcttctcaggcttgctattgatgatgtgcttgattccctgaagccg
aaagaaagcctggtgatcagacagagatacgggcttgatggtaagggggatagaacattg
ggggagattgctggaaacttaaatatttcacgagaaatggttcgaaagcatgaagtcaag
gctctcatgaagctcaaacatccagctcgagtagattatcttcgcagatacatagtctaa
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