Malus domestica (apple): 103439869
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Entry
103439869 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase SINAT5-like
KO
K04506
E3 ubiquitin-protein ligase SIAH1 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103439869
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103439869
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103439869
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
SINA (Seven in absentia) proteins
103439869
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sina_TRAF
Sina_ZnF
Sina_RING
zf-C3HC4_2
DUF7567
Motif
Other DBs
NCBI-GeneID:
103439869
NCBI-ProteinID:
XP_008376717
LinkDB
All DBs
Position
07:join(35202832..35203086,35203980..35204366,35204746..35205108)
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AA seq
334 aa
AA seq
DB search
MDLESIECVSSSDGLDEDEIHPHHNTTLHPHSHPHPHHHEFSKPRSNVTTNATIAGPTSI
APATSVHELLECPVCTNSMYPPIHQCHNGHTLCSTCKSRVHNRCPTCRQELGDIRCLALE
KVAESLELPCKYYSLGCPEIFPYYSKLKHESVCNFRPYNCPYAGSECSVVGDIPFLVTHL
RDDHKVDMHTGCTFNHRYVKSNPREVENATWMLTVFHCFGQYFCLHFEAFQLGMAPVYMA
FLRFMGDENEARNYSYSLEVGANGRKLIWEGTPRSVRDSHRKVRDSHDGLIIQRNMALFF
SGGDRKELKLRVTGRIWKEQQNQDSGVCIANLCS
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggacttggaaagcatcgagtgtgtgtcgtcctcagatggacttgatgaggacgagatc
catccccaccataacactactctgcacccgcattctcaccctcatccgcaccaccatgaa
ttttccaagcccagaagcaatgtcactaccaacgctaccattgccggccccacctccatc
gctcccgccaccagcgtccacgagctgctcgaatgccctgtctgcaccaattccatgtac
ccgccaattcatcagtgccacaatggccacacactgtgttccacttgtaagtcgagggtg
cataatcgttgcccaacttgtaggcaggagcttggagatattaggtgcttagctctggag
aaggtggctgagtcacttgagttaccctgcaagtattactccttgggatgcccagagata
ttcccgtattacagcaaactaaagcatgaatcggtgtgcaacttcagaccgtataattgc
ccttatgctggatcggagtgctctgttgttggagatatccctttcctggttacccatcta
agggatgatcacaaggtggacatgcacacaggatgcacattcaaccatcgctatgtgaag
tcaaatcctcgggaagtagagaatgccacttggatgctaacagttttccattgttttggt
caatacttctgccttcattttgaagccttccagctcggcatggctcctgtttatatggca
tttctacgttttatgggcgacgagaatgaggcccggaactacagctacagcctagaggtt
ggagccaatggcaggaaactcatatgggaggggacgccacgaagtgtgcgtgatagccac
cgaaaggtcagggatagccacgatggtctcattatccaacgaaacatggctctattcttc
tctggaggcgacaggaaggagctgaagctgagagttaccgggaggatatggaaggaacag
caaaatcaggattccggggtgtgcatagcaaacctgtgtagctaa
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