Malus domestica (apple): 103439883
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Entry
103439883 CDS
T03194
Name
(RefSeq) cyclic nucleotide-gated ion channel 1-like isoform X5
KO
K05391
cyclic nucleotide gated channel, plant
Organism
mdm
Malus domestica (apple)
Pathway
mdm04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
103439883
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
mdm04040
]
103439883
Ion channels [BR:
mdm04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
103439883
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Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
PPDK_N
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
103439883
NCBI-ProteinID:
XP_008376737
LinkDB
All DBs
Position
07:complement(join(35672823..35673329,35673441..35673719,35673840..35673951,35674053..35674357,35683289..35683486,35683585..35684069,35684964..35684985))
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AA seq
635 aa
AA seq
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MWRTRQRGPWKVLLTLVLYAVRTQKHEPRKFLHIWSKIFVMSCVFAVSLDPLFLYTLIID
QDNKCLQMDKKLSTTVLVLRSFTDIIFVVPFLYKVHKSVKFQMHKNLGANVAANTTRTVA
SSTKQIEGNLYRKSKGRALTKVGKKIAQKMSWFSFSIINDFLSLLPVPQLLIIVTFYNMR
GAEYVEHRKVLNVFILGQYLPRVYRVHQSSKKLQETAGIWIKGLFNFFLYMLASHILGGF
WYFFSIQQETLCWYNACAKHSPDPIGCMNTFYCGRQTTTSRNITLLNEHCPLDTPDGVLP
PFNFGIFLDSLKNRNLDHIKFEKKFFYSFWWGLRNLSNFGTNLITSTYVWENLFAILISV
VGLLLFLYLIGNVQTFMQMEATKTEERRQKAEEDEETKQKISMKMLDVRRWISENKFPDD
VKEEIMDSMAKILKQDKDADVHKPFLILPWQTKRSVKRHLFMGTLKKVNRLKGMNEKVLT
LMCDCLKPVTYGETSFVFRMGDPLDCMMFIIQGTVWTYGSSDNQVGQGVSSMAIKRVGKG
YIYGEELLDWASDCFNELPVSSKHVKSQTKVEAFVLLAKDLETVVSRCKTYWDLHNCNNP
EEVAVSTVRRFFRRPQRRPPLSSAEIWNDINRRTL
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgtggagaaccaggcagcggggaccttggaaagtattgcttacactggtattatatgct
gtaagaacgcaaaaacatgaaccgaggaaattccttcacatatggagtaagatatttgtt
atgtcctgtgtatttgccgtctcactagatcctctgttcttgtacactttaatcattgat
caagataacaagtgtcttcaaatggacaaaaagctcagcactactgttcttgtgttgcga
tcattcacggatatcatttttgttgtgccttttctatataaagttcacaaaagcgttaaa
tttcaaatgcacaaaaatttgggggctaatgtggctgcaaataccacgagaactgtggcc
tcaagtaccaagcaaattgaaggaaatttatacaggaaatcaaaaggaagagcgttgact
aaagttggcaagaaaatagcccagaagatgtcgtggttttctttctccatcataaatgat
tttctctctcttcttcctgtcccacaactactaataatagttacattttacaatatgaga
ggcgctgaatatgtagaacatagaaaggttctgaatgtctttattctgggtcaatatcta
ccaagggtatatcgagttcaccaatcgtccaagaaacttcaagagactgctggaatttgg
attaaaggcctattcaatttttttctctacatgcttgccagtcatatacttggaggtttt
tggtatttcttttctattcaacaagagacattatgctggtataatgcttgtgcaaaacat
agtccagatcctatcggatgtatgaatactttttactgtgggcgtcaaactactacttcg
agaaatataacacttctaaacgagcattgcccgttagatactccagatggtgtcttacca
ccatttaattttggaatatttcttgattctcttaagaatcgtaacttagaccatataaag
ttcgaaaagaagttcttttactccttctggtggggcttgcgaaatctaagtaattttggg
acaaatctgataacaagtacgtacgtgtgggaaaacttgtttgcgattctcatttctgtt
gttggcttgctgctgtttttatatctcattggaaacgtgcagacttttatgcagatggaa
gctacaaaaacagaggagaggagacaaaaagcagaggaagacgaggagacgaaacagaag
atttcgatgaagatgctagatgtacgcaggtggatatctgaaaataaattccctgatgat
gtcaaggaagagatcatggatagcatggcgaaaatattgaaacaagacaaagatgctgat
gtgcacaagccattccttattcttccctggcaaaccaaaagatctgttaaacgccatctt
ttcatgggtacacttaaaaaagtaaacaggcttaaaggcatgaatgaaaaagtgttgacg
ttgatgtgcgactgtctgaagccagtgacgtacggtgagaccagcttcgtttttcgaatg
ggagatccactcgattgcatgatgttcattatccaaggaacagtgtggacctacgggtcg
agtgataatcaagttgggcaaggagtctcatcaatggccatcaagcgcgtcgggaaaggt
tacatttatggggaggagcttctcgactgggcatcagactgtttcaacgaacttccagtc
tccagcaaacatgtcaaaagtcagacaaaagtggaagcatttgtgctcctggccaaggac
ttggaaaccgtagtctccagatgcaaaacatattgggacttgcacaattgtaacaatccc
gaagaggtggcagtctctaccgttcgtcgtttctttagaaggccgcaacgacgtccgccc
ctgtcctcggctgaaatatggaatgacattaatcgtagaacgctctaa
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