Malus domestica (apple): 103440213
Help
Entry
103440213 CDS
T03194
Name
(RefSeq) putative tRNA pseudouridine synthase Pus10
KO
K07583
tRNA pseudouridine synthase 10 [EC:
5.4.99.25
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mdm03016
]
103440213
Enzymes [BR:
mdm01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
103440213
Transfer RNA biogenesis [BR:
mdm03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
103440213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pus10_C
Pus10_N_euk
Motif
Other DBs
NCBI-GeneID:
103440213
NCBI-ProteinID:
XP_008377102
LinkDB
All DBs
Position
8:475026..480821
Genome browser
AA seq
534 aa
AA seq
DB search
MANETQDASQATVNGDNAQSLCDVVRGLPSRAVVDLWSSGVCTRCILRLFGIREHDYYRS
SLSRSILSSVLGDSEKHLVDSNVREPVVCRVCLGILQFTYSADNKLVVERESASELAVSI
SDLIRQQGFQIDGFSLEVSIPPIIQENDRIAWLYMKRKFESELWFQGKSLSECISAKDAL
KISLTEILETMLGCKSSISSFRIRLTYTHRIATITVDSSNEGCKRRKTGSGNGLDRINDD
IKCSGFSTSEADAVVQRSFVSLQAIESPECLKLPLEQSSEPCCLEFLCYRTQIYVGGRYL
KYSRNVSQSCWIIDDERMGEASVEEILGSNVLPICRGDNYKFHAAGREDIDVRMLGSGRP
FLLEIQNARLVPSDDSVKSLEIAINNLENKLVGVKNLKLVDSQSWDLMREGEAEKQKQYV
ALVWISRPLKDEDLHFISSLKDTHIQQSTPIRVLHRRSPLEREKIIHWMRIEKIVGSSQY
FLLHLCTQAGTYIKEFVHGDLGRTQPSIGSIFSCRAEILQLDVTDVKMDCFLTE
NT seq
1605 nt
NT seq
+upstream
nt +downstream
nt
atggcaaacgagacccaagatgcttcgcaggccaccgttaatggcgacaatgcgcaatct
ctctgcgacgtcgtccgagggttgcctagtcgcgccgtcgtagacttatggtcctccggc
gtatgcaccagatgcatcttacggttgtttgggatcagagagcatgattactatcgttct
tcactatcgcggtcaatcttgagttcagttcttggagattcagagaaacatttggtggat
agtaatgttagagaaccggtagtttgtagagtttgtttggggatcttgcagttcacttat
tctgcggataacaagttggtggtagaaagggagagtgccagtgaattggctgtttccatt
tccgatctgattaggcaacagggctttcagattgacggcttttctcttgaagtatccata
cctccaattatccaggaaaatgatcgtattgcttggctatatatgaaaagaaagtttgaa
tctgaactttggttccaaggaaaatcactctctgaatgcatttctgcaaaggatgctcta
aaaatttctcttacggagatccttgaaacaatgttgggttgtaagtccagcataagcagt
ttccgcatccgtttgacatacactcaccgtatagcaacaataacagttgatagttctaat
gaggggtgcaaaagaagaaaaacaggttcaggcaatggtttggacagaattaatgatgac
atcaaatgctctgggttttcgacaagtgaagctgatgcggttgttcaaaggtcttttgtg
agtttgcaagctattgaatcgcctgagtgcctgaagttacctctagagcagtccagtgaa
ccttgctgtttagagtttctctgctaccggacgcaaatttatgttggtgggagatacctg
aagtactcgagaaatgtgagtcaatcctgttggattattgatgatgagagaatgggagaa
gcatctgtcgaggagatactaggtagcaacgttcttcctatatgtcgtggtgataactac
aagtttcatgctgccggaagagaagatatcgatgtaaggatgttgggttctggaaggccg
ttcctgcttgagatacaaaacgctcgccttgtcccgtctgatgactctgtaaaaagtttg
gaaatagcgataaataacttggaaaataaattggtaggcgtgaaaaatctgaagctggtt
gatagtcagtcatgggatctaatgcgtgaaggggaagcagagaaacagaagcagtatgtt
gcgttagtgtggatttctcgccctctcaaggatgaggacttgcattttatatcttcactt
aaagacactcatattcagcagagtactcccatcagggtgcttcaccgccgaagtccatta
gaacgagaaaagatcatacattggatgagaattgagaagattgttggaagttctcagtat
tttcttttgcatctgtgtacccaggctggaacgtacattaaggaattcgttcatggggat
cttggacgcacccaacctagcattggatcaatttttagttgtagagcagagatactgcag
ctcgatgtaacagatgtgaagatggattgctttctcactgaatga
DBGET
integrated database retrieval system
