Malus domestica (apple): 103440391
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Entry
103440391 CDS
T03194
Name
(RefSeq) E3 ubiquitin-protein ligase XBAT33-like isoform X1
KO
K19044
E3 ubiquitin-protein ligase XBAT32/33 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103440391
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103440391
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103440391
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_5
Ank_4
Ank_3
RING_XB3-XBAT31
Motif
Other DBs
NCBI-GeneID:
103440391
NCBI-ProteinID:
XP_008377291
LinkDB
All DBs
Position
01:join(29563242..29563418,29563525..29563584,29563942..29564013,29564176..29564360,29564728..29564888,29564981..29565039,29565124..29565170,29565244..29565387,29565580..29565671,29565822..29566363)
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AA seq
512 aa
AA seq
DB search
MGNSFGCSASGERLVSAARDGDVVEAKMLLDCNPCLAKYSTFGGLNSPLHFAAAKGHNEI
VSLLLENGADANSRNYCGQTALMQACRYGHWEVVQTLLLFRCNVARADYLTGRTALHFAA
VNGHVRCIRLVVADFVPSAPYESLTTQTDSDRGDSANAVNKNEQSALSKLVNKVADCGIT
ALHMAALNGYFDCVQLLLDLQANVSAVTFHYGTSMDLIGAGSSPLHYAACGGNLKCCQIL
LARGASKTTLNCTGWLPVDVARMWGRHWLEPLLAPNSDSTIPAFPLSNYLSLPLMSILNI
ARECGFKSVTTSTDDTDTCAVCLERPCSVAAEGCKHELCVRCALYLCSTSNIPSETVCPP
GSIPCPLCRHGIISFVKLPGSPAKENRLQMSLGLCTPCILHPRDPERLSPACAPEIRKNR
VASVSSDMLCPVTCSPFPSVTIPLCTCNDGPCPSFESREAETQDELPRRPQATSTDQDKM
EGPRLGKTTCSNMFWSRRSCSREHQCNAEINA
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgggcaattcattcgggtgctctgcctccggcgaacggctggtttcggcggcgagagac
ggcgatgtagtcgaggccaagatgctcttggattgcaatccttgccttgccaaatactcc
accttcggcggcctcaactctcctctccatttcgccgccgctaaaggccacaacgagatt
gtttctttgctgctggagaatggagctgatgccaattccaggaattactgcgggcagaca
gcattgatgcaagcgtgccgatatggacactgggaagttgtacagaccctcttgctcttc
agatgcaatgttgcaagagcagactatcttactggcaggactgctcttcattttgctgct
gtaaatgggcatgtaagatgtataagactagtcgtggctgactttgttccaagtgctcct
tatgaatctctgaccactcagacagatagcgacagaggtgatagtgcaaatgccgtgaac
aaaaatgagcaaagtgctctatccaaacttgtaaataaggtagcggattgtggtatcact
gctctccatatggctgctttgaatggatattttgattgcgtacagctcctacttgatctt
caagcaaatgtgtctgctgtgacatttcattacgggacttctatggatttgataggagct
ggaagttctccactgcattatgctgcttgtgggggtaacttaaagtgctgtcagatcctc
cttgcaagaggtgccagcaagacgactttaaactgcactgggtggcttccagttgatgtt
gcccgaatgtgggggcgccactggcttgaaccacttctagcacccaattctgactcaaca
ataccagcgttccccctatctaattacctatccttgcctctcatgagcatattgaacata
gcgagggaatgtggatttaagtccgtgacaacatcaaccgacgacacagatacttgtgct
gtctgtctggaaagaccatgttcggtagctgcagaaggctgtaagcatgagctttgtgta
agatgcgcactctatctttgctcaacgagcaacataccttcggaaacggtgtgcccacct
gggtccattccatgcccgctttgtaggcacggaatcatctcttttgtcaaattgcctggc
tccccagcaaaggaaaatagattacagatgtcacttggcctttgtaccccttgtatactt
caccctcgtgacccagagcgtctttctccagcttgtgcaccagagatccgaaagaaccgt
gtggcttcagtttcttcggatatgctctgtccagtcacatgcagtccatttccttctgtc
accattcctttgtgcacgtgcaatgatggaccatgcccctcatttgaatcccgggaggca
gaaactcaagatgaattgcccagacggccccaagcaacatcaacagaccaggacaagatg
gaagggccgagacttggaaaaacaacatgctcaaacatgttttggagcagaaggagctgc
agtagggagcatcagtgcaatgctgaaataaatgcttga
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