Malus domestica (apple): 103440650
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Entry
103440650 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K19022
AP-5 complex subunit beta-1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mdm03400
]
103440650
DNA repair and recombination proteins [BR:
mdm03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AP-5 complex
103440650
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP5B1_middle
AP5B1_C
AP5B1_barrel
Motif
Other DBs
NCBI-GeneID:
103440650
NCBI-ProteinID:
XP_008377567
LinkDB
All DBs
Position
07:join(25040698..25042188,25043244..25043683,25043874..25045392)
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AA seq
1149 aa
AA seq
DB search
MTDKPPEAPSPSPPSPPPLRQLSPQDWESLIDDFQHGGARQDRWTSAQPILLSLLDQALS
SIAKRDFPLKLHVITFLEEFSDPLFSTAIANDAVSGRKVLHRLIETLRALIQTPPDGVHI
TFALKEQMMISVTSVVVSLDDDVVPISTVESLVELLLTVINRPNHGVDRQARAVACECLR
EMEKARPSLLSEIGGHLWSLCQNERTHAAQSYILLFTTVVHNIVIENLSVSILNTTAPLV
PFSSPQSGSGKEGSGGLNYKELRRAMAFLLEWPQVLTPCAMVEFLALVMPMAAALELQAS
MLKVQFFGMVYSSDPMLCHVVLTMFPRFWDAFDGQEGDIAWRLVLLSKESQHHLVFRLLA
VHWLLGFGQLVLRREVKKVKTIVDMGSRFYPSVFDPLALKALKLDLLAFCSVCVDVLKPE
KSVSGEDGEVNDKLVVKLFEDGLVCVSAFKWLPPRSTETSVAFRTLHRFLIGASSHSDND
PSTTRSLMDSTTFRNIQGMLVDLMLECRRLVPVVVVLTDRLLGCQKHRWLGERLLQAFDE
HLLPKVKLDYSLVSFFPIFDRIAESDTIPPCGLLELLTKFMAFLVGKHGPYTGLRSWSQG
SRVLGICRTLLMHHKSSRLFLRMSRLLAFTCLYFPDLEVRDNARIYLRLLICVPGKKLRD
LLNLGEQLSISPSSHANFNVQTPRFSLSLKKSKTVSSYVHLERIIPLLVKQSWSLSLSSL
GIGSSDPGYLGGITDIEPIIEDSDIDDSSDVQIAPEAQAIDDNNNVQIIPEDRRIDQPPE
PLRVTDSKLSEILRMLRMHFSCIPDFRHMPGIKVRLSCSLRFESEPFNRIWGVDCHAGGS
NELDALPAIYATVLKFSSSAAYGSIPSYHIPFLLGEPPRKTNIPDQTASLAIVPVENACG
EEEPYRAPVTIELEPREPTPGLIDVSIETSAESGQIIRGQLHTITVGIEDMFLKAIVPPD
IQNDSIPGYYLDLFSALWEACGTSNTARETFQLKGGKGVTAISGTRSVKLLEVPASSLIQ
ATERYLAPFVVSVIGEPLVTTVKEGGIIRDIIWKDEASDSSLDITSSETNFHRGPLHLTY
GDDAEERDSPVNTRKTNMGSFLILIFLPPRYHLLFQMEVSDVSTLVRIRTDHWPCLAYTD
DYLEALFLA
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataagccaccagaagcaccatctccgtcaccgccgtcacctccgccattaagg
caactctctccccaagactgggagtcgttaatcgacgacttccagcacggcggcgcacgc
caggacagatggacctccgctcagccgatactcctctccctcctcgaccaagccctctcc
tccatcgccaagcgcgacttccccctcaagctccacgtcatcaccttcctcgaggagttc
tccgacccgctattctccactgccatcgctaacgacgccgtttccggacgcaaagtcctc
caccgcctcatcgaaaccctacgcgccctgatccagacaccgcccgatggggtccacatc
acgttcgccctcaaggagcagatgatgatctctgtcacctccgtcgtcgtctctctcgac
gacgacgtcgttccgatctccaccgtcgaatcgctggtggagctgctgttaaccgtgatc
aaccgtcccaatcatggcgtcgaccgtcaggcgcgtgccgtggcgtgcgagtgcctgcgc
gagatggagaaggctcggccctccttgctctctgaaatcggcggacatctctggagcttg
tgccagaacgagaggactcacgccgctcagagctacattctgttgttcaccaccgtcgtt
cacaacatcgtcatcgaaaatctcagcgtttcaattctcaatacgacggcgcctttggtg
ccgttcagttcgccgcagagcgggtcaggtaaggagggttcgggtgggttgaattacaag
gagctgaggagggcaatggcttttctgctagagtggccgcaagtgttgacgccgtgtgcg
atggttgagttcttggctctggtaatgccaatggcggcggcattggagctccaagcttcg
atgctcaaggtccaattttttgggatggtttattcgtctgatcctatgctctgccatgtt
gttttgaccatgtttccgaggttctgggacgcgtttgatgggcaggaaggcgacattgca
tggaggcttgtgctgctatccaaagaatcgcagcaccacttggtttttcgattgctggcg
gtgcattggttgcttggttttggtcagttagtgttgagaagggaagtaaagaaagtgaag
accattgttgatatgggttcgagattctatccgagtgtgttcgatccccttgctttgaaa
gccttgaagcttgacctgcttgcgttttgctctgtttgtgttgatgtcttgaaaccggag
aagagtgtttcgggcgaggatggtgaggtgaatgataagttggtggtgaagttgtttgaa
gatggacttgtttgtgtatcagcattcaaatggttgcctccgcgaagtactgaaacctcg
gtggcatttcgaactttgcacaggttcttgattggagcttcgtctcattcagacaatgat
ccttccaccaccagaagtctcatggactccaccactttcaggaatatacaggggatgttg
gtggacctgatgttggagtgtcggagattggtccctgtggtagttgttttgactgatcgc
ttgttgggttgtcaaaagcaccgttggttgggagagcgcctgcttcaggcatttgatgag
catttgcttccaaaagtgaaattggattacagtttggtttctttctttccaatatttgat
agaattgctgaaagtgatacaattcctccttgtggattgctagagcttctcaccaagttc
atggccttccttgttggtaaacatggcccatatacaggactaagatcatggtctcaggga
agcagagttcttggcatctgtcgaaccttgttgatgcatcacaagagctctcgattgttc
cttagaatgtctcgccttttggcatttacttgcctttactttcctgatttggaggttcgt
gacaatgcaaggatctaccttcggcttcttatctgtgtgccgggaaagaagctcagggac
ctgctgaatcttggggagcaactcagtatttcaccgtcttcacatgccaatttcaatgtc
cagactcctcgcttttctcttagtctcaagaagtctaagactgtctcttcatatgtccac
cttgagcgcataatccccctactagtcaaacagtcttggtccttgtctttatcatctttg
ggtattggaagtagtgatcctggttacttaggaggcatcacggacattgaacccataata
gaggatagtgatattgatgacagtagtgatgtccagattgcaccagaagctcaagcaatt
gatgacaataataatgtccaaattatccctgaagatcgaagaattgatcaaccaccggag
ccattgcgtgtgacggattcaaagctttcggagatattaagaatgctgaggatgcatttc
tcatgcattcctgacttcagacatatgccaggaattaaggttagactatcatgtagtttg
aggtttgaatctgagcctttcaatcgaatatggggagttgattgccatgctggtggttcg
aatgaattagatgcccttcctgctatatatgcaacagtgctaaaattttcgtcctctgca
gcatacgggtccattccatcatatcatataccttttcttctaggtgagcctcccagaaaa
actaatatacctgatcagaccgcctcattagctattgttcctgtagaaaatgcttgtgga
gaagaggaaccgtatagagctcctgtaacgattgaattggaaccacgggaacccacgcct
ggtctaattgatgtttcaattgaaacaagtgctgaaagtggtcagataatcaggggacag
cttcacacaatcactgttggcatagaggatatgtttctcaaggctattgtaccacctgac
atccagaatgattccatacctggttattacttagatttgttcagtgctctttgggaggca
tgtggcacttcaaacactgcacgcgagacatttcagttgaaaggaggcaaaggggtcact
gctatcagtggtactcggtcggtcaagctacttgaagtccctgcatcatccttgattcaa
gctaccgagcgctatttggcacccttcgttgtaagtgtgattggtgaaccacttgttact
actgtaaaggaaggaggaatcattagggacataatctggaaggatgaggcctcagattcg
tcccttgatattactagctccgagaccaattttcatagaggcccacttcatcttacatac
ggtgatgatgcagaggaaagggacagtcctgtcaatacccgcaaaacaaatatgggtagc
tttcttattttgatatttcttccaccaaggtatcatcttctcttccaaatggaagtatct
gatgtttcaacgttagtacgaattcgaactgatcactggccgtgcttagcgtatactgat
gattatttggaagcattatttttggcatag
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integrated database retrieval system
