KEGG   Malus domestica (apple): 103440681
Entry
103440681         CDS       T03194                                 
Name
(RefSeq) uncharacterized protein isoform X2
  KO
K14772  U3 small nucleolar RNA-associated protein 20
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:mdm03009]
    103440681
Ribosome biogenesis [BR:mdm03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    103440681
SSDB
Motif
Pfam: UTP20_N UTP20 UTP20_C RYDR_ITPR
Other DBs
NCBI-GeneID: 103440681
NCBI-ProteinID: XP_008377594
LinkDB
Position
17:complement(join(24605510..24605778,24606195..24606327,24606516..24607037,24607765..24608049,24608684..24608963,24609039..24610840,24610956..24611021,24611209..24611334,24611673..24612059,24612157..24612338,24612424..24612560,24613502..24613965,24614823..24615299,24615672..24615933,24616023..24616169,24616282..24616462,24617146..24617485,24617571..24617823,24617945..24618137,24618461..24618807,24618893..24618967,24619068..24619269,24619544..24619747,24620328..24620510,24621023..24621129,24621477..24621550,24621657..24621735,24621934..24621978,24622098..24622255,24622374..24622496,24622609..24622677))
AA seq 2723 aa
MATLSQAQAVKSLNKSPGRRRFVFKNFSERLDDVEIDVFRSLDKIKSEPHEGSTFFRDCL
VEWRELNTAEDFISFYEQMTPLVQTLPLILLHKETIISELVSRLQMDARLSLEPILTLIA
ALSRDILEDFIPFLPRIADSLVSLLESGADREPEIIEQIFTSWSSIMMYLQKYLVQKIKH
ILKVTVKLRYYPKYHIQKFMAEAVSFLLRNAPFEQLKEGVRKIMFEVVKKSTDTRKEGVS
KLLYFVMRGTSSRFHSRAERMLHFLMDDLILCIGEQFNEGSETVLEVLKSALESLCVDLD
SKELNLMFNCLYREITDCVINGGVERLSRLLSLLVSTVQVKNGQRVSDYQHMIEIVGLVM
PKGITMAEESSSDVVDKLLELMLCILRGLHNLSDMSTISSCSLQWAPVFDLKNPSLLGFV
RELLKEDVCIVNIFRAYILRAMNDLIETSQEDVIYLLLTFCEKQQTEIQSLTFLDETPER
VSRIQDFLRGTINNWVGVLKGIGNGDSSSTIILEVDLALLWGTINCFPQVVESENDLSLL
KDLIDAYDQILMIEADNVAGFPKHTWESLIGATLNSYYKMIRGKKSELDETSRFLHLGKR
HKSCAQVLVAVADFLDSVYGSMMEGDTESRTYHPELKADMAVEALDIFADNLCQSDREIR
ASTLRILCHFETLNCNTFTEDYPVAKKMRTEVFPTCHVDKQGLNVLALLLSIESTPLSIS
TSRKVTLLISRIQMALSAGRIAEAYLPLVLNGMIGIFHNRFSYLWNPASECLAVLISQNI
GLVWENFVSYFEQCQSRFQASFDQIDKVNSKTTNKSIGLLGHFDSCVKSTSTSTPSAAVL
SSLLQSLQRIPTLIESKSRQILPLFLKFMGYSCEDFRSCNIGSFNPSVCRGKEWKGVLKE
WLNLLKLMHNLKSFYQNQFLKEVLQIRLLDENDDEIQTKVLDCLFIWKDDFLLPYCQQLK
NLASFHNLREELTTWSLSRESNLIEEHHRAYLVPIVIRLLMPKVRKLKKHANQKHSGVNH
RKSVLGFISQVDVEELPLFFVLLVKPLQIVPMGSDGAANWFWTLPNVSLAEFQASHFLKY
FTVSSISALSWKKRSGFLHVIEDILGVFDILRVGPFLDFLMGCVARLLESCSLSIEVAKT
KEAGKAKGSSLENNLDVNRTLLGKDSAVETNVSISPALGQLRDLRSLCLKIVSFVLNKYE
DHDFSSEFWDLFFVSVKPLIDRFKQEGSSGQKPSSLFSCFLALSRSQKLVPLLCREQKLV
PDILSILTVTSTSEAIVSCVLKFVDNLLTLDHEWGDEDSAVKRVILPNLEALIDSLHCLF
QSNNAAKRKLYKHPGETEKRIFQFLPKYIEHALPARKFLDILLPVLANGAQNSDFCFEAV
QVIRDMVPILGNEITNKILNAVSPLLTSTDLDKRVFICDLLEAVARADPSVQFVAKLLQD
LNATSVTELGSLDYDKVVNAYEKISVDIFYTVREDHALVILSHCVYDMSSEELILRHSAY
NSLRSFVEFAALILGQVDHCEMPDKMSASDDHCWTRACIQRITNKFLLKHMGNALKRGTS
VRKEWVDLLRQMVKNLPEVANLGSLKDLCDDDAEIDFFNNIVHLQKHRRARALTRFRNVI
SASYMPEGITKKVFVPLFFNMLLEEHEGKGEHVKNMCIEALASISSHMEWNSYYSLLMRC
FNEMNKNPNKQKLLLRLICSILDKFHFSDAKDSLDNDSNTGTTDTGSTILRKCSNSVSIN
EIQTCLQKVVLPKIQKLLSDSEKVNANISLAALRVLRLLPGDVMDSQLPSIVHRVSNFLK
NRLESIRDEARSALAACLKELGLEYLHFIVKVLRATLKRGYELHVLGYTLNFILSKFLVT
PISGKLDYCLEDLLYIVQNDVLGDVAEEKDVEKIASKMKETKKQKSFETLKLISQSITFK
SHALKLLSPVTAQFEKHLTPKTKTKLESMLTHIGAGIECNPTVDQTDLFIFIHGLIEDGI
KEENGQSENLFITWVNGRRRNVMTGKDISSGGVSGGKSVCSHLISVFALGILLKRIKNVK
LGKADVQMLSMLDPFVLLLGKCLKSKYEDVVSASLRCLTRLVRLPLPAIESQADSIKAAL
FGIAGSTGNTGSSQMESCLRLLTELLRGTKITLSSDQLHLLIQLPLFVDLERNPSFVALS
LLKAIVNRRLVVPEIYDLVTRVANLMVTSQVEPIRHKCSKILLQFLLEYRLSTKRLQQHL
DFLLSNLRYEHSSGRKTVLEMLHTIIVKFPQNVVDEQSQTFFVHLVICLANDQDNEVRSL
AGVAIKCLIGYISSHSFRSILEYSLSWYLGGKQQLWSAAAQVLGLLVEVMDKEFQKHVNK
LLPVEDVEKEFLKHINRILPATKSILLSAIDTVTDEQLDFSNETSIPLWKEAYYSLVMLE
KMLHQFHSLCFDRDLEDIWAAICELLLHPHMWLRCISSRLVALYFDAAKAASKDDGKPFG
IYYLIRPSRLFMIAASLCCQMKTQLNDDAASNLITENLAFSVCHVHSLIGQTECADPHQF
WSNLEQHEQAHFLRAFELLDARKGRSMFLSLTSGICDPNDESASKNIRYLLVSNLLKKMG
KTALQMEAIQMKIVFDSFQKVSSYLSEEDCRLYAYEILLPLYKVGEGFSGRVIHENTKQL
AQEVTDSIRKKLGTQKFVLVYGDIRKNLKAKRDKRKNEEKRMAVVDPMRNAKRKLRIAEK
HRANKKRKIMSMKMGRWTHSKPK
NT seq 8172 nt   +upstreamnt  +downstreamnt
atggccactctctcccaagctcaggccgtcaagtccctcaacaaatcccccggacgccgc
cgtttcgtattcaagaatttctctgagagacttgatgatgtcgaaatcgatgttttccga
agcctcgataaaattaagtcggagccgcatgagggctctacttttttccgagactgcctc
gtcgaatggagggaactgaacacggctgaggatttcatctctttctatgagcaaatgacg
ccgttggtccaaacgttgcctttgattctgttgcacaaggaaaccataatctcagaactc
gtttcgagattacagatggatgcaaggctgtcgcttgagcccattctcacgttaatcgcc
gctctgtcgagagatatcctggaggactttatccctttcttgccgaggattgctgattct
ctagtgtctcttctagaaagtggtgcagatagggagccagagatcattgagcagatcttt
acatcttggtcatctattatgatgtacttgcaaaaatatcttgtacaaaagattaagcat
atactaaaggttactgtaaaattgaggtactatccaaaatatcacatccaaaaatttatg
gcagaagcggtctcattcttgctgagaaatgcaccttttgaacaacttaaagaaggtgtc
agaaagatcatgtttgaagttgtgaagaaatcaactgataccagaaaagagggagtcagt
aaattactgtattttgtcatgagaggaacctcatcaaggttccattctagagctgagaga
atgttgcatttcctgatggacgacttgatactttgcattggtgaacaattcaacgaaggt
tcagagactgttcttgaagtcttaaagtctgcgttagaaagtttatgtgtggatttggac
tccaaggaattgaacttaatgttcaattgcttatatcgggaaataactgactgtgtgatt
aatggaggtgttgaacgcttaagccgcctgttgtcgttgcttgtttctactgtgcaagtt
aagaatggccaaagggtttctgattaccaacatatgattgaaattgtggggttggtcatg
cctaagggcattacaatggcagaggagtcttcatctgatgttgttgataagcttttagag
ttaatgctctgtattcttaggggactacacaatttaagtgatatgtcaaccatctctagc
tgttcattgcagtgggctcctgtatttgatctaaagaacccaagcttgttgggttttgtt
cgagaattattaaaagaggatgtttgcatagtaaatatcttcagagcttacattttaagg
gcgatgaatgatttaatagaaacttcccaggaagatgttatttatttgttactcaccttc
tgtgaaaaacagcaaacggaaatccaaagcttgaccttcttagatgaaacacctgaaaga
gtttcaaggattcaagattttctgcgtgggactatcaacaactgggttggggttttaaag
ggtattggaaatggggactcatcatccacaataattcttgaagttgacttggctctgctg
tggggaaccatcaactgctttccccaagtagtagaatctgaaaatgatttatccttgtta
aaggatttaatagatgcatatgatcaaattctgatgattgaagctgacaatgttgcaggt
tttcctaagcacacttgggagagcctaattggtgctaccctgaattcctattataaaatg
atacgtggtaaaaaatctgagcttgacgaaacaagcagatttttgcatcttggaaaaaga
cacaaatcatgtgcgcaagtgttggttgctgttgctgattttttggattcagtgtacggg
tctatgatggaaggagacaccgagtctagaacatatcatccagaattaaaagcagatatg
gctgtagaggctttagacatatttgctgataatttatgccagtcagacagagagattcgc
gcttcaactcttcgaatattgtgccactttgaaactctaaattgcaatactttcacagag
gattacccagttgcaaagaaaatgagaaccgaagtttttccaacttgtcatgtggataaa
caaggcttaaatgttcttgcgctccttctctccattgagtcaactcctctttcaatttct
accagcaggaaagttactcttttgatttctagaatacagatggccctctctgctggtaga
atagctgaagcttatctgccccttgttttgaatgggatgattggtatcttccataaccgg
tttagttacctttggaatcctgcatcagagtgccttgcagttctgattagccaaaacatt
ggacttgtgtgggaaaattttgttagttattttgaacaatgccaatcgagatttcaagca
tcctttgatcaaattgacaaagtaaattctaagacgaccaacaagtcaattggcctgctc
ggacactttgattcatgtgttaagtccacgtctactagtacaccttctgcggccgtgtta
tcttcattgctccagtctttacaaagaattccgaccctaattgaatctaagtctcgccag
attttacctttgtttttgaagtttatgggctacagttgcgaagactttagaagctgcaac
atcgggtctttcaatccaagtgtttgtagaggcaaagagtggaaaggtgtccttaaagaa
tggttaaacctgctgaaactgatgcacaaccttaagtccttctatcaaaatcagttcctt
aaagaggttttacaaattagacttttagatgaaaatgatgatgaaatacaaacaaaggtt
cttgattgtctgttcatatggaaagatgatttcctgcttccatactgtcaacaattgaaa
aacctagccagctttcataatttgagagaggaattaacaacgtggagtttatccagagag
tctaatctaattgaggaacatcacagagcttaccttgtgcctatagttatccgtcttctg
atgcccaaagtccgcaagttgaagaaacatgctaatcagaagcattctggagtaaatcat
cggaagtcagttcttggtttcatatctcaagttgatgttgaagaacttcctcttttcttt
gtattgttggtaaagcctttgcaaattgttccaatgggaagtgatggtgctgcaaactgg
ttttggactttgccaaatgtttctctggccgaatttcaagcatcgcatttcctaaaatat
ttcactgttagcagtatatcagccctgtcttggaagaaaagatctggttttctgcatgtg
atcgaagatatccttggagtttttgatatattgcgtgttggtccctttcttgattttctt
atgggatgcgtcgcccggttattagaaagctgcagtttaagtattgaggtggcaaagacc
aaagaggcggggaaggccaagggatcttcattggaaaataatctggatgtgaaccgtact
ttgcttggaaaagatagtgcagtggagactaatgtttcgatctccccagctttggggcag
cttagggatctcaggtctttatgccttaaaattgtctccttcgttctcaacaagtatgaa
gatcatgattttagtagtgagttctgggacctattctttgtgtcagtcaagcctttaatt
gatcgtttcaagcaggaaggatctagcggccagaaacctagttcgctcttctcttgtttt
cttgcgctgtctagaagccaaaaacttgtaccactactttgcagggaacaaaaacttgtt
cctgatatactctcaattctaacggtcacatcaacatccgaagctattgtatcttgtgtt
ctcaagtttgttgataacctgttgactcttgatcacgagtggggtgatgaagatagtgct
gtgaaaagagttatactcccaaaccttgaagcactcatcgatagcctgcattgtcttttt
cagagtaataatgctgccaagaggaaattatataaacacccaggagagacagagaaaaga
atttttcagttcttacctaagtatatagaacatgctttgccagccaggaaatttttggat
atcttgcttccagttttagcgaatggagctcagaattcagatttctgttttgaagcagtg
caagtaattcgtgatatggttccaatactggggaatgagattacaaataaaattcttaat
gcagtatctccactacttacttctactgatctagataaacgtgtttttatttgtgatctt
cttgaggctgttgctagagcagacccttctgttcaatttgtggcaaaactgttacaggac
ttgaatgcaacatctgttactgaactgggtagccttgattatgacaaagttgtcaatgct
tatgaaaagatcagtgttgatatcttctatacagtccgagaggatcatgcattagtcatt
ttgtctcattgtgtctatgacatgtcatctgaagaattaatcttgaggcacagtgcatac
aattcattgcgctcatttgttgaatttgctgccctaattcttggccaagtagaccactgt
gaaatgcctgacaagatgtcggcatctgatgatcattgttggaccagagcgtgcattcag
agaataacaaacaagtttcttttgaagcatatgggcaatgctttgaagagaggaacttct
gtcagaaaggaatgggttgatttactaagacaaatggtgaaaaatctaccagaagtggca
aatctgggttcattgaaggatctttgtgatgatgatgctgaaatagattttttcaacaat
atcgttcacctacagaaacataggagagcaagggcattgacacgctttaggaatgttatc
agtgccagctatatgccagagggcatcacaaagaaagtgtttgtacccctctttttcaat
atgttgttggaggagcatgaaggaaaaggggaacatgtcaaaaatatgtgcatagaggcc
cttgcttcgatttcgagtcacatggaatggaattcatactactcgttgttgatgagatgc
tttaatgagatgaacaagaatcctaataaacaaaagctccttctgcggctaatctgttcc
atcttggacaagtttcacttttcagatgccaaagactccttggacaatgattccaacaca
gggaccactgatactggctctacaatcttgcgtaagtgtagcaattctgtttcgataaat
gaaatacagacttgccttcaaaaagtcgtgctgcctaagatacaaaagttactgagtgat
tctgaaaaggtcaatgctaacatcagtcttgctgcactaagagtattaaggttgcttcct
ggagatgtaatggactcacagctgcctagcattgttcatcgagtttcaaattttttgaag
aatcgattggaaagcatccgtgatgaagctaggtccgctttggctgcttgtttgaaggag
ttggggctggaatacttgcattttatagtcaaggttttgcgagctaccttgaaacgggga
tatgagttacatgtgctcggttacacactaaactttattttgtcaaagtttcttgttact
ccaattagtggaaaattggactattgtttggaagatctcctttatattgtacagaatgat
gttcttggagatgttgctgaggaaaaagatgttgaaaagattgcttccaagatgaaagaa
actaagaaacagaagtcttttgaaaccctgaaattgatttctcaaagcataacattcaaa
agccacgcgttgaagcttctgtcacctgttacagctcaattcgagaaacatttgacacca
aaaaccaagacaaaattggaaagtatgttaactcacataggtgctggtattgaatgcaat
ccaactgttgaccagacagacctatttatattcatacatggcctgattgaagatggaata
aaagaagaaaatggtcagagtgagaatttgtttattacatgggtaaatggacgtcggcga
aatgttatgactggaaaagatatttcctcggggggtgtctcaggtggtaaatcagtatgt
tctcatcttatttcagtttttgctcttgggatattgctgaaacgcataaagaatgtgaaa
ttgggaaaagctgatgtacaaatgttgtcgatgttggatccttttgtcttactgttaggg
aagtgcttgaaatccaagtatgaagatgtcgtatctgcatcacttagatgcctcactcga
ctggtcaggttgcctttacctgccatcgaatctcaggcagatagtattaaagccgcgctg
tttggtattgctggaagtacgggtaatactggaagttctcaaatggagtcatgcctgagg
ttgttaacagaacttctgcgcggcaccaaaatcactctttcctccgaccagctacatctg
ctaattcagcttccattgtttgttgatctcgagaggaatccctcctttgttgctctttca
cttctaaaggcaattgttaaccgcaggctagttgttcctgagatatatgatcttgtaaca
agagttgcaaatttgatggtaacaagtcaagtagaaccaattcgtcacaagtgtagcaag
attttattgcaattcttacttgaatatcgtctctccacaaaacgtttgcaacaacatttg
gattttctgctgtcaaatctgaggtatgagcattcaagtggaaggaaaactgtgcttgag
atgctccacacaattattgttaaatttccacaaaacgttgtagatgagcagtcacagacc
ttttttgtccatttggtgatttgcttggctaatgatcaagataatgaagttcgttccttg
gctggagttgctataaaatgtctcattggctatataagctcacattcatttcgttccatt
cttgagtacagcctatcttggtatttgggtgggaagcagcaactatggagcgctgcagca
caggttttgggacttctggttgaagtcatggataaagaatttcagaagcatgtcaataaa
ttattgccagttgaagacgtggagaaagaatttcttaagcatatcaacagaatattgcca
gcgactaagagtatcttactgtctgccattgatacagtcactgatgagcaactagacttt
tctaatgaaactagcattcctttgtggaaggaggcatattattcgttagttatgctggag
aaaatgctgcatcagtttcatagtttatgctttgatagggatcttgaggatatatgggca
gcaatttgtgaattacttctgcatccacacatgtggttacgctgcatttccagtcgcctt
gtagctttgtactttgatgctgccaaagccgcctctaaagacgatggaaaaccatttgga
atttactatcttattagaccaagtagacttttcatgatagctgcatctctctgctgccaa
atgaagacacagctcaatgatgatgctgccagcaatctgattactgaaaatcttgcgttc
agtgtttgtcatgtgcattcattgattggacaaacagagtgtgctgatccacatcaattc
tggtccaaccttgaacagcatgagcaagcccattttcttcgagcttttgagttgctcgat
gctagaaaaggaaggagcatgtttttatcccttacctctggtatatgcgacccaaatgat
gaaagcgcctctaagaatatccgatacttgctcgtctctaacctgctcaaaaaaatgggc
aagactgcccttcaaatggaggcaattcagatgaaaattgtctttgatagttttcaaaaa
gtttcttcctatttaagtgaggaagactgccggctttatgcctatgaaatcctgctgccg
ttgtataaagttggcgaaggattttctgggagagtgattcatgaaaatacgaagcagtta
gcacaagaagttacagacagcatacgaaagaaactaggcacccaaaagtttgtactagtt
tacggtgacatcaggaagaatctcaaggcgaaaagggataagaggaaaaacgaagaaaag
cgcatggctgtcgttgatcccatgcggaatgctaagaggaaactgaggatagcagagaag
catcgtgccaacaagaaaaggaaaataatgtcgatgaaaatggggaggtggacacattcg
aagccgaagtaa

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