Malus domestica (apple): 103441256
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Entry
103441256 CDS
T03194
Name
(RefSeq) serine/arginine-rich splicing factor RS40-like isoform X1
KO
K12893
serine/arginine-rich splicing factor 4/5/6
Organism
mdm
Malus domestica (apple)
Pathway
mdm03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103441256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103441256
Spliceosome [BR:
mdm03041
]
Common components
Common spliceosomal components
SR proteins
103441256
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
Nup35_RRM_2
RRM_5
RRM_Nup35
RNA_bind
Motif
Other DBs
NCBI-GeneID:
103441256
NCBI-ProteinID:
XP_070676272
LinkDB
All DBs
Position
01:join(29413524..29413629,29415186..29415307,29415404..29415639,29415763..29416494,29416594..29416621)
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AA seq
407 aa
AA seq
DB search
MRPIFCGNFEYDARQNELERLFGRYGKVDRVDMKSGFAFIYMEDERDAEYAIRGLDRKEF
GQKGRRLRVEWTKVANQERGTRRPGASRRSSTNTRPSKTLFVINFDPYHTRTKDLERHFD
SYGKIVSVRIRRNFAFVQYESQEDATRALEATNMSKLMDRVISVEYAVRDDDERKDGFSP
DRRSRDRSPDRGRDRRRSPSPYKRERGSPDYGRGPSPGAYRRERGSPDYGRGASPYRRER
VSPDYGCGRSPSPYRRDRSDHGRVSSHSPRKERVSADLVRDRSRSRSPYGREKIGVGNGH
GPSRSPYKRERGSPENGPRRSPYKRERDSPEIGRLPSSSPYKRERASPENGRGPSGSPYE
KGRASLENGRVASPNSPPEARDSPNYGGPESPMNERYSSRSPQAEEE
NT seq
1224 nt
NT seq
+upstream
nt +downstream
nt
atgaggccgattttttgcgggaattttgaatatgatgctcgacagaatgaattggagcgg
ctgtttggtagatatgggaaagttgatagggtcgatatgaagtctgggtttgctttcatc
tatatggaggatgagagagatgctgaatatgccattcggggacttgaccgaaaagaattt
ggtcaaaaaggacgcaggctacgtgtcgaatggacaaaggtagcaaatcaagaacgtggt
actagaagacctggtgcatcaagaagatcttcgactaatacaagaccttcaaagaccttg
ttcgtcataaattttgatccatatcacacaaggaccaaggatttggagaggcactttgat
tcatatgggaaaatcgtcagtgtaaggatcagaagaaattttgcatttgttcaatatgag
tcgcaagaggatgctaccagggcattggaagctacaaacatgagcaagttgatggatcga
gttatatcagtggaatatgcagttcgtgatgatgatgaaagaaaagatggatttagccct
gaccggagaagtcgtgataggtctccagacagaggtcgtgatagaagaaggtccccaagt
ccctacaaaagagagagaggtagccctgattatggtcgtggccctagccctggcgcctac
cggagagagaggggcagtcctgattatggacgtggagcaagtccttatagaagggagaga
gtaagtcctgactatggctgtgggcgcagcccgagtccatataggagggacaggtctgat
catggccgcgtctctagtcatagtcctagaaaagaaagggtgagtgctgaccttgttcgt
gatcgtagccgtagccgtagtccttatggaagagagaagattggggtaggcaatggccat
ggtcccagtcggagcccatataagagagagaggggtagtcctgaaaatggtcccagacgt
agtccatataagagagaaagggatagtcctgaaattggccgtctcccaagcagtagtcca
tataagagagagagggccagtcctgaaaatggtcgtggccccagcggaagtccttatgaa
aaggggagggccagtctggaaaatggtcgcgttgcaagcccaaattctccgcctgaagct
agggacagccccaactatggagggcctgaaagccccatgaatgagagatatagcagccgt
tctccacaagctgaggaggaatga
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integrated database retrieval system
