KEGG   Malus domestica (apple): 103441318
Entry
103441318         CDS       T03194                                 
Name
(RefSeq) helicase and polymerase-containing protein TEBICHI
  KO
K02349  DNA polymerase theta [EC:2.7.7.7]
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mdm03400]
    103441318
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     103441318
DNA repair and recombination proteins [BR:mdm03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerases
    103441318
SSDB
Motif
Pfam: DNA_pol_A POLQ_helical HTH_61 DEAD Helicase_C LAMTOR ResIII
Other DBs
NCBI-GeneID: 103441318
NCBI-ProteinID: XP_070682900
LinkDB
Position
08:complement(join(10402164..10402264,10402356..10402452,10402625..10402765,10402865..10402973,10403484..10403836,10404046..10404153,10404238..10404427,10404748..10405007,10405201..10405398,10405534..10406678,10407365..10407482,10407587..10407805,10408152..10408373,10408830..10408982,10409178..10409528,10409709..10409921,10410085..10410324,10410418..10410579,10411488..10411688,10411852..10412052,10412144..10412249,10412602..10412666,10413706..10414569,10414748..10414955,10415109..10415560,10416039..10416071))
AA seq 2169 aa
MASPPRSRVNQYFSSKKRKPSSPASKSGRNEKDVKTMVEGSPDAKGTLENYLLGSQDNSI
SPKPSHRVCDSLAQQDQVQRNLTSVMDSSLKDEFKQLPLSYQLHSQANNASKENQKETFE
GLTKVGDGAVGDTVKDYLAFTEGGESAELKEFAADFLSLYCSDVQPNESTLPEMKVNDHK
RQASPSQLDREDKIFKKRHLITNQSHMEHESSCCSEKSSEAMQSGRPDENRVTIVNELLE
LQSTLKTCSNTPKQFLDMFKCYTPGSMTRKSIVSETPKSRGSSSFSPGEAFWNDAIQLAD
GLCAQAAEVISAADIQYHSKSSCNLRNAPCDGKSKEMLNEGERMDNSANSGPKGKYRKDL
DKEVSPLPVKHFDFSCEDKNLGEVVPHHCDAYNLKSAALIGGEQSESSLADHRGLRNTIM
TRCSKSQENQVIFREPDTDTVNAVTNMKVDLTGKDNDSMTSYSPVDEVVKLTGNHESSEA
STPSSSMPLKDRLDLNSWLPPEICSIYRKKGISKLYPWQVDCLQVDGVLQRRNLVYCAST
SAGKSFVAEILMLRRVLSTGAMALLVLPYVSICAEKAEHLDVLLEPLGKHVRSYYGNQGG
GTLPKDTSVAVCTIEKANFLINRLLEEGRLSEIGIIVIDELHMVGDPSRGYLLELLLTKL
RYAAGEGNSGSSSGESSGMSSGKADTAHGLQIVGMSATMPNVAAVADWLQAALYQTEFRP
VPLEEYIKVGNTLYNKKMDIVRTFPKAADLGGKDPDHVVELCNEVVQEGLSVLIFCSSRK
GCESTARHVSRFLKKFSPNIRSDDSEFHDVALAIDALRRCPAGLDPVLEETLPAGVAYHH
AGLTVEEREIVENCYRRGLVRVLTATSTLAAGVNLPARRVIFRQPKIGRDFIDGTRYRQM
AGRAGRTGIDTKGESVLICKPEEIKRIMGVLTESCLPLRSCLSEDMNGMTHAILEVVAGG
MVQTANDIHRYVRCTLLNSTKPFQDVVKSAQESLRWLCHRKFLEWNEDTKLYSITPLGRA
AFGSSLCPEESLIVLDDLSRAREGFVLASDLHLVYLVTPINVDVQPDWELYYERFMELSA
LDQSVGSRVGVTEPFLMRMAHGAPVRSSNRFRENLKPLHGKYESGPGMNNDTVLQDDQIL
RVCKRFYVALILSRLVQEAAIIEVCEAFKVARGMVQALQENAGRFASMVTMFCERLGWHD
FEGLVCKFQNRVSFGVRAEIVELTTIPYVKGSRARALYKAGLRTSLAIAEASIPEIVKAL
FESSSWNEQEGSAQRRIQVGVAKKIKNGAHKIVLEKAEEARVAAFSAFKALGLDVPQFSR
PVFLTGGGSPSMQGAGNSSGDNSTSSFPNVEHSTEYAAKPSLEGRVHSEKVAEVRSTGVM
QIKSGPENSKVHIRGSATPVDELTVVVDQNKNTDLPDRVQLQSLVDRTRASDESHDLEKQ
ERCRRDNLSSGYKGNACEKGPIHAVNTLGGFDSFLDLWQSTSEFYFDIHYNKRSEFNSVA
PFEIHGIAICWENSPVYYVNIPRDLLCSDSGKNECLNLNGSGNRSNGLPLDDLLEMAECR
WNRIGKIMGKRGVRKITWKLKVQIQALKSPAVHTQRFGCQNLGGKSACFEIIDSSFLLLP
PVHIKDGIDMCIVAWVLWPDEERSSNPNLEKEVKKRLSSEAAAAANRNGRWKNQMRRAAH
NGCCRRAAQIRALCSVLWKLLVAEGLTEALLNIEIPLVNILADMELWGVGLNMEGCLQAR
KVLGKKLGQLEKEAYKLAGMKFSLSTAAEIANVLYGHLKLPIPEGRNKGKQHPSTDKHCL
DLLRDEHPIIPVIKEHRTLAKLLNCTLGSICSLGRLSVRTQKYTLHGHWLQTSTATGRLS
MEEPNLQCVEHMVDFKMNEDGNGNKTDVDQFNINARDYFIPTQDNWLLLTADYSQIELRL
MAHFSKDSALTELLSNPHGDVFTMIAARWTGISEESVSSHVRDQTKRLVYGILYGMGANS
LAEQLDCSPEEASEKIKNFRSSFPGVASWLNEAVAYCRTKGYIETLKGRKRFLSKIKLGN
SEEKSKAQRQAVNSICQGSAADIIKIAMINIYSVIVEGVERPDSSSHPATKLHILKGRCR
ILLQVHDELVLEVDPVVIKEAALLLQTSMENAVSLRVPLDVKVKVGRSWGSLQPFQADQY
KDKAVVPEQ
NT seq 6510 nt   +upstreamnt  +downstreamnt
atggcgtcgcctcctcggtcgcgcgtcaatcagtatttttcttcaaagaaaaggaagcct
tcatcacccgcatcgaagtctgggagaaatgaaaaagatgtaaaaactatggtagagggt
tcgcccgatgccaaaggcactttggagaattatttgttgggttcacaggacaatagtatc
tccccaaagccttcgcacagagtttgtgattcattagcccagcaagatcaagttcaaagg
aatttgacatcagtgatggatagttccttgaaagatgaatttaaacagctccccttgtct
tatcaactgcactctcaagctaataatgcctccaaagaaaatcagaaggaaacattcgag
ggattaaccaaggtgggtgatggtgcagttggagatacggtgaaggattacttagctttc
acagaaggtggggaaagtgcagaacttaaagagtttgcagcagactttttgtctttgtat
tgcagtgatgttcaaccaaatgaaagtactctgccagagatgaaagtaaatgaccataag
agacaagctagcccatctcagcttgaccgggaggacaagatatttaaaaagaggcatctc
attaccaatcagtcacacatggaacatgaatcaagttgctgcagtgagaagagttctgaa
gccatgcagtctggtcgtcctgatgaaaatagggttaccatcgttaatgaactgctcgag
ctccagtcaaccttgaaaacatgcagtaatacaccaaaacaatttttagacatgtttaaa
tgctatacaccaggttcgatgactagaaaatctattgttagtgaaacccccaagtcacgt
ggaagctcatcattttcacctggagaagctttttggaatgatgccattcaacttgctgat
ggcctgtgtgcacaagcagcagaagtaattagtgctgcagacatccaatatcatagtaaa
agttcatgcaatttgagaaatgcaccctgtgatggcaagtcaaaggaaatgctgaatgaa
ggtgagcgcatggataacagtgctaattcagggccaaaggggaagtatagaaaggattta
gataaagaagtgtccccactgccggttaaacattttgatttttcttgcgaagacaaaaat
ttgggtgaagttgtaccacatcattgtgatgcatacaatttaaaaagcgcagctcttata
ggtggtgagcaatctgaatccagccttgcagaccatagaggtctgagaaatactatcatg
acccgttgcagcaaatctcaggaaaatcaagtcatatttcgagaaccagatacagatact
gttaatgcagtgaccaacatgaaagtggatttgacaggcaaagataatgatagcatgaca
tcttattcaccagttgatgaagttgtgaagttgactggtaaccatgaatctagcgaagca
agtactccttcaagctctatgcctctcaaagatcgcctcgatctgaacagttggcttcca
ccagaaatatgcagcatatacagaaagaaaggaatttcaaaactgtatccttggcaggtt
gattgccttcaggtggatggtgtattgcagagaaggaatctcgtatattgtgcatcaaca
agtgctggcaaaagttttgttgcagaaattctaatgttgcggcgggtcttatcaactgga
gcaatggctttacttgtactgccttatgtatcaatttgtgcagaaaaggcagaacatttg
gacgtacttcttgaaccacttggtaagcatgttcgtagttattacggaaaccaaggtggt
ggaacacttcccaaagatacttctgtagctgtttgcacaatagaaaaggcaaactttttg
ataaacaggctgctggaagagggtcgtctttcagaaattgggattattgtgattgatgaa
ttgcacatggttggagatccaagtaggggttatcttctggaacttctgttgaccaaactt
cgttatgcagctggtgaaggcaattctggatcaagtagtggagaaagttcaggtatgagt
agtggtaaggctgacactgctcatggtctgcaaattgttgggatgagtgcaactatgcca
aatgtggcagccgttgctgattggcttcaggctgcactataccagacagaatttcgacca
gtaccattagaagaatatattaaagttggtaacaccctttataacaagaaaatggatatt
gttagaacatttcctaaagcagctgaccttggtggtaaagatcctgatcatgttgtggag
ctgtgcaatgaggttgttcaagagggtctttccgtgctaatattttgctctagtcgaaaa
ggatgtgaatcaacagcaaggcatgtttcaagattcctcaagaaattttcacctaacatt
cgcagtgatgacagtgaatttcatgatgttgctttggctattgatgccttacgaaggtgc
cctgctggtttggatccagtattagaagaaactcttcctgctggtgttgcctatcaccat
gctggcctcacggttgaggagagagagattgtcgaaaattgctaccgtagaggcctggta
cgtgtcttaactgctacatctaccttagcagctggggttaatctaccagctaggcgggtc
atttttcgtcagcccaagattggtcgtgattttattgatgggacaaggtacagacagatg
gctggtcgggctggtcgaactggaatagatacaaaaggagaaagtgtacttatttgcaag
ccagaagagatcaaaagaattatgggagttcttactgaaagctgtctgccattgcgttct
tgtctatctgaagatatgaatggaatgacccatgctatcttagaagttgtagctggggga
atggttcaaactgctaatgacattcatcgatatgttaggtgcacacttctaaactccact
aaaccatttcaagatgtggtgaaatcagcacaggaatctttgaggtggttgtgccacagg
aaatttctagaatggaatgaggatactaagttatacagtatcacacctcttggacgtgca
gcatttggcagttccctctgccctgaagaatcgcttattgtgctggatgatctttcaaga
gcaagagaagggtttgtgcttgcatctgatttgcatttagtttacctagtaacaccaata
aatgttgatgttcagcctgattgggaactgtattatgaacggttcatggaattgtctgct
cttgaccagtctgttggcagtcgtgttggagtgacagaaccatttttgatgcgcatggca
catggtgcacctgtgcgttcatcaaacaggttcagagaaaatctgaaaccgctgcatgga
aaatatgaaagtggacctggaatgaacaacgatactgtacttcaggatgatcaaatactt
cgagtgtgtaaacggttctatgttgctctcatcctgtcaagactagttcaggaagctgct
atcattgaggtttgtgaagctttcaaagtggccagaggtatggtgcaggccttacaagag
aatgctggaaggtttgcatctatggtaaccatgttttgtgagaggcttggatggcatgat
ttcgagggcttggtttgcaagttccaaaatcgtgtttcatttggagtgagagccgagatt
gtagagcttactacaattccatatgtcaagggttctcgagcaagggcactctataaagct
ggcttgcgtacttctttagcaattgctgaagcgtccatccctgaaattgtcaaagctctt
tttgaatcttcatcatggaatgaacaagaaggttcagctcaaaggcgcatccaagtaggc
gtagcaaagaagatcaagaatggtgcacacaaaatagttcttgaaaaagctgaagaggca
agagttgctgccttctcagctttcaaagctcttggattagatgtcccacaattttctcga
ccggtatttttaactggcggtggaagtcccagtatgcaaggagcaggaaattcctctggt
gataactccactagtagctttcctaatgtagagcacagcacagagtatgctgctaagcca
tctttggaaggtagggtccattctgaaaaggttgcagaagtaaggtcaactggtgtcatg
caaattaagtctggtcctgaaaattctaaagtacatattcgagggtctgctacccccgta
gatgagcttactgttgtggttgatcaaaacaaaaatactgatttgcctgaccgggttcag
ttacaaagcttagttgatagaactagggcatctgatgagtctcacgatcttgaaaaacag
gaacgctgcagaagggataatttgtcctctggctataagggcaatgcttgtgagaaaggc
ccaattcatgcagttaatactcttggtggttttgattccttcttggatctctggcaatcc
acctcagagttctattttgatattcactacaacaaaagatcagaattcaattctgttgcg
ccctttgaaatacatggcatagccatctgttgggaaaactctcctgtgtactatgtcaat
attcctagggatctactgtgctcagacagcggtaaaaatgaatgcttgaatttgaatgga
tccggcaatagaagtaatggcttacctcttgatgatttgttggagatggctgaatgtaga
tggaacaggattggtaaaataatgggaaaaagaggtgttagaaaaattacttggaagttg
aaagttcagattcaggcacttaaaagtcctgcagttcatactcagagatttggttgtcag
aatctcggagggaaaagtgcttgttttgaaatcatagacagctcatttttattgttgcct
ccagttcatataaaagatggaattgacatgtgcatcgtggcctgggttctttggcctgat
gaggagagaagctctaatcctaacctggaaaaggaagttaagaaaaggttatccagtgaa
gctgcggcagctgctaatcggaatggaaggtggaagaatcagatgcgaagagctgcacac
aacggttgctgccgtcgggctgcacaaatacgggccttatgttctgttctttggaagtta
cttgttgctgaaggccttactgaagccctcctaaatattgaaatcccattggttaatatt
cttgctgacatggagctatggggagtgggtcttaacatggagggatgcttacaagcacgc
aaggtgttaggaaaaaagctaggacagcttgagaaggaagcttacaagctagctggcatg
aaattttcgttatctacggcagcagaaattgctaatgtattgtatggacacttaaagctg
cccataccagaggggcgcaataaggggaagcaacatccaagtacggacaagcattgcttg
gatttattaagggatgagcatcctataattcccgtcattaaagagcatcgtacattggca
aaactcttaaactgtacattgggatcaatttgttcactgggtaggctatccgtgaggaca
caaaagtacacattacatggtcattggctccaaacatcaacagcaactggtcggctttca
atggaggaaccaaatctccagtgtgttgaacatatggttgactttaaaatgaatgaggat
ggaaatggaaacaaaactgatgtcgatcaattcaacatcaatgctcgtgactacttcatt
cctactcaggacaactggttactgttaactgcagattattctcagattgaattgcgtctg
atggcacatttctctaaagactctgcactcactgaactccttagtaatccccatggtgat
gtcttcaccatgatagcagctagatggactgggatttcagaagagtctgttagttcccat
gtacgagatcagaccaaaaggttggtgtatggcattctttatggaatgggtgctaatagc
cttgcagaacaactggactgcagtccagaagaagcttccgaaaaaataaagaactttaga
agttcttttcctggagttgcttcttggcttaatgaagcagttgcatattgccgcacgaaa
ggatacatcgaaacccttaagggaagaaagcgctttttgtcaaaaataaaactaggaaac
agtgaagaaaagtcgaaggctcagagacaagctgtgaattctatatgtcagggatctgct
gctgacataattaagattgcaatgataaatatatattccgtgatagttgaaggtgttgaa
aggcctgattcttcttctcatcctgcaacaaagttacacatactgaagggccgctgccga
attttattacaggtacatgatgaattagtactagaagttgatcctgttgtgataaaggaa
gctgctttgctgcttcagacgagcatggaaaatgctgtttcgcttcgtgttccattggat
gtcaaagtgaaagtcggaagatcgtggggttccttgcaaccttttcaggccgaccaatat
aaagataaagctgttgtgcctgaacaatag

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