Malus domestica (apple): 103441346
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Entry
103441346 CDS
T03194
Name
(RefSeq) cytoplasmic 60S subunit biogenesis factor REI1 homolog 1-like
KO
K14816
pre-60S factor REI1
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mdm03009
]
103441346
Ribosome biogenesis [BR:
mdm03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
103441346
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Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_2
zf-C2H2_jaz
C2H2-zf_KIN17
Clr5
zf-met
Motif
Other DBs
NCBI-GeneID:
103441346
NCBI-ProteinID:
XP_008378248
LinkDB
All DBs
Position
08:join(11787622..11787726,11788896..11789459,11789559..11789728,11790028..11790246,11790383..11790542)
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AA seq
405 aa
AA seq
DB search
MSGLTCNSCNKEFLDDSEQKLHYKSEWHRYNLKRKVAGVPGVTEALFIARQAALAQEKNG
LSETPMLYSCGLCGKGYRSSKAHAEHLKSRSHILRASQGASEQEEKPIIRPLPSRVVNKT
PPKREANDEETDESEDEWVEFDPDEDLSKSLTDMNVDEHASEEDMDEDNDFEELDPTCCF
MCDHDHNTIESCMVHMHKQHGFFIPDIEYLKDPKGLLTYLGLKVKRDFMCLYCNDRRHPF
NSLEAVRKHMVAKSHCKVHYGDGDDEEEAELEEFYDYSSSYVDEAGKQLVVSGDMDNSVE
LGSGGSELIITRRSDDGISSKTLGSREYLRYYRQKLRPSPANGVAITAALASRYRSMGLA
TVQSKERMVRMKVLKEMRRSGVEAMRSKMGMKSNVIRNLPKNCTY
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgtcagggctaacatgcaactcttgcaacaaggagtttctggacgactcggagcagaag
ctccattacaagtccgaatggcaccgctacaatctcaagcgcaaggtagctggggttcct
ggagtgacagaagcgttatttatagcgagacaagctgcacttgctcaggagaaaaatggt
ttgagtgaaaccccgatgctctacagttgtggtctttgtggcaaagggtatagaagttct
aaggctcatgctgagcacctcaagtcacgaagtcacattctgcgggcctctcaaggggcc
agtgaacaagaagagaagccaataattaggccacttccgagtcgtgttgttaacaaaact
cccccgaaaagagaggcaaatgatgaggaaactgatgaaagtgaagatgagtgggtggag
tttgatcctgacgaagacttgtcaaaatctttgactgatatgaatgtggatgagcatgca
tctgaagaggatatggatgaagataacgactttgaggaattggatccaacttgttgcttt
atgtgcgatcatgatcacaacaccatagagagctgcatggttcacatgcacaaacaacat
ggattcttcattcctgatatcgagtatttaaaggatccaaaaggcctccttacttatctt
ggtctcaaggttaaaagggatttcatgtgtctgtactgcaatgataggcgccatcctttt
aatagtttggaagcagttaggaagcatatggtggcaaaaagccactgcaaggtacattac
ggtgatggtgacgatgaagaggaagctgagttggaagagttctatgattacagcagcagt
tatgtggatgaggctggcaaacaactcgtagtatccggtgatatggataatagcgtagaa
cttgggagtggtggttctgagctcattattactagaagatctgatgatggtatatcatcg
aaaacacttggttccagggaatacttgcgctattatcgccagaagctgcgcccatcacct
gctaatggtgtcgccattacagctgcattagcctcaaggtaccgaagcatgggattggca
acggtgcagtcaaaagaacgaatggtcaggatgaaggtactgaaggaaatgagaagatcg
ggagtggaggctatgcggagtaagatgggaatgaaaagcaacgtcatccggaacctgccc
aagaattgcacatattag
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