KEGG   Malus domestica (apple): 103441447
Entry
103441447         CDS       T03194                                 
Name
(RefSeq) protein PAT1 homolog 1
  KO
K12617  DNA topoisomerase 2-associated protein PAT1
Organism
mdm  Malus domestica (apple)
Pathway
mdm03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    103441447
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103441447
Messenger RNA biogenesis [BR:mdm03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103441447
  mRNA degradation factors
   5'-3' decay
    Decapping complex
     103441447
SSDB
Other DBs
NCBI-GeneID: 103441447
NCBI-ProteinID: XP_028963949
LinkDB
Position
09:complement(join(10228060..10230137,10230797..10230872,10231783..10231839,10232227..10232375,10233025..10233079))
AA seq 804 aa
MERSNGTDFRDLLESSSSENKLFDASQYEFFGQNVVDEVELGGLDHEEGRKPLFGPADNE
YHLFEKDEALGMGSLSDIDDLASTFAKLNKVVTGPRHPGVIGDRGSGSFSRESSSATDWA
QDGDFNNWLDQHMFDTEFSQEGKRWSSQPQPSSARFSESKQPKPLYRTSSYPDQQPVQHH
FSSEPVVPPKSAFTSFPPPGNKSPQGSPHQLNLSALAGGSQLPFSAPNLSPLSNSNLHMA
GLPHGLHYGGNMPQFANPSLPFNSRSQSHWVTHAGVLHGDHSSLRNNMLQQQLPHQNGLL
SPQLLSAQQQLQQQRLHHSVQPSLAHFAAMQSQFYGTHPSSSHKSMHGLSDTSNHRPKRG
KHRFSQGSDTGSQKSESGWIQFRSKHMTSEEIESILKMQHAATHSNDPYIDDYYHQASLS
KKAAGSRSKHPFCPSHLREFSSRGRNSTDQHTHSSVDALGRIPLASIRRPRPLLEVDPPP
GSGDGEQVSEKPLEQEPMLAARIAVEDGLCLLLDVDDIDRLLQHGQPQDGGVQLRRRRQI
LLEGLAASLQLVDPLGKGSHSAGLAPKDDIVFLRLVSLPKGRKLLSKFIQLLFPGSELAR
IVCMTVFRHLRFLYGGLPSDPGAAETTSNLAKRVSTCVNGMDLRALSACLVAVVCSSEQP
PLRPLGSPAGDGATIILKSVLERATVLLSDPHAAGSCSISNRALWQASFDEFFGLLTKYC
LSKYETIVQSIFTQSQQSTEAIGSEATKAIHREMPVELLRASLPHTDERQRKLLSDFAHR
SMPISGLNGHGGNGGQMNSESVRG
NT seq 2415 nt   +upstreamnt  +downstreamnt
atggagagatctaatggcacagatttcagggacttgcttgagagttcctcgtcggagaat
aaactctttgatgcatcacaatatgaatttttcggtcaaaatgtggtggacgaagttgag
ttggggggtttggaccacgaggaaggcagaaaacctttgttcgggcctgctgataatgag
taccatttatttgagaaggatgaggctcttggtatgggatctttatctgacatagatgac
ctggcaagcacttttgcaaagttaaacaaagttgtaacaggaccaagacatccaggtgtt
attggagacagaggttcagggtctttttcacgagaaagttcatcagctactgattgggcc
caagacggagatttcaataactggttagatcagcatatgtttgatacagaattttcccag
gaaggaaagaggtggtcgtcacagccgcaaccttcttctgctcgattttcagaatcaaaa
cagccaaaacctttgtacagaacatcgtcttacccagaccagcagccagtccagcatcac
ttctccagtgaaccagttgtaccgcccaagtcagcattcacatcattccctcctcctgga
aacaagtccccgcagggctcaccacatcagctgaatctttctgctcttgcgggtggttcc
cagttacctttttctgcaccaaacctttctcctttatctaactctaatcttcatatggcc
ggtttacctcatgggttgcattatggagggaacatgcctcagtttgccaaccctagcctt
cctttcaatagcaggtcacagagtcattgggttactcatgctggagtattgcacggcgat
cattccagcctcagaaacaatatgttgcagcaacagctccctcatcaaaatggacttctt
tccccacaattattgtcagcacagcagcagctacaacagcagagattgcaccattcggtt
cagccatctttggcccattttgctgcaatgcagtctcaattttatggtactcacccttct
tcatcccataagtcaatgcatgggttgtcggacacaagtaatcatagaccgaaaagagga
aaacatcgtttttctcaaggctctgatactggtagtcagaaaagtgagagtgggtggatc
cagttcaggtctaagcacatgacatctgaagagatagagagtattcttaaaatgcagcat
gccgcaacacacagcaatgacccctatattgatgattattaccaccaggcaagtctttcc
aaaaaagcagctggctcgcggtcaaaacatcctttttgcccatctcatcttagagagttc
tcttcccgcggccgtaatagtactgatcagcatactcatagttctgtcgacgctcttggg
agaattccccttgcttccatacgtaggcctcgccccctccttgaagttgaccctccccct
ggttctggtgatggcgagcaggtctctgagaagcctctggagcaggaaccaatgcttgct
gctagaattgccgttgaggatggcctttgtctccttcttgatgttgatgatattgatcga
ctgctacagcatggtcagccccaagatggtggggttcaactcaggcgaaggcggcaaata
ctgctggagggtttggctgcatcacttcagcttgttgacccacttggtaaaggcagccac
tcagcggggctggctccaaaggatgacattgtgttcctacgtttagtttctcttcctaag
gggcgaaagctcctttctaagtttattcagcttctcttccctggtagcgagcttgcccgt
attgtgtgtatgacagtattccgtcatttaaggtttttgtacggtggcctaccctctgat
cctggagctgctgagacaactagtaatcttgcaaagagagtttctacatgtgtaaatggt
atggatcttcgtgcgttaagtgcttgtcttgttgcagtagtttgttcatcagagcagccg
ccgctccgaccccttggaagccctgctggagatggggccactattatcctaaaatctgtt
cttgaaagggcaactgtactcttaagcgaccctcacgctgctgggagctgtagcatttct
aaccgtgccctttggcaggcatcctttgatgaatttttcggtcttctcactaagtattgc
ctgagtaagtatgaaacaatagtacaatcaatatttacgcagagtcagcaaagcacagaa
gctattggttcagaggccaccaaggcgatacatcgtgaaatgcctgtggagcttctgcgt
gctagtcttcctcacacagatgagcgtcaacggaagcttttgtctgattttgctcatcga
tcaatgcccatttctggtcttaatggccatggcgggaacggaggtcaaatgaactctgaa
tctgtgaggggatag

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