Malus domestica (apple): 103441759
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Entry
103441759 CDS
T03194
Name
(RefSeq) RNA-binding KH domain-containing protein RCF3-like
KO
K21444
poly(rC)-binding protein 3/4
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103441759
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Other mRNA localization factors
103441759
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
KH_1
KH_2
KH-I_KHDC4-BBP
KH_KhpA-B
KH_Vigilin
MOEP19
KH_N4BP1_2nd
Motif
Other DBs
NCBI-GeneID:
103441759
NCBI-ProteinID:
XP_008378683
LinkDB
All DBs
Position
08:complement(join(27259234..27259377,27260342..27260530,27260786..27261121,27261366..27261620,27261766..27262221,27262498..27263196))
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AA seq
692 aa
AA seq
DB search
MSAPLTPSKRPHEESVTETNGKGKLQKSENLDSKLSAGNVAFRVLCPASKVDNVTGEGGS
VISQIFQETLVKVRVEEPVPGCDERVIIVGSDRENDVGSEHRKEDGIEDANVDEKQDDAK
APREKDETQESVPIEDSKSDTEDSVTPSLQKALQLVFERIVEGETETDGGDEESNKSLTF
VCRLLVLSSQVGCLLGKGGSVIKQMSSESGAQIRILPRDKLPLCASASDELVQITGNIDA
ARKAIESVSQQLLENLPRDSDDSLPTTGPSSNSFGQPLPRPEIYPPPNHSQGAPDIDQPG
DFADSHSAAHRLNPKLHGSGIPRRMKPSQEVLTFRLLCPEERVGGVIGKGGTIIKTLKQE
TGCEIKVMEGVPDSDDRLIVISGPAHPDDRISPVQDAVILVQSRIFRAIPNIKEQSMMAR
LLVFSNQIGCLLGKGGAIIAEMRKLSRAHIRIMGKDQIPKCASVDEEVVQINGEFEAVKD
ALLQITTRLRLHFFGDAFPSINYHQNPAFLDQPPFQSYLRRDFSPPRMHSNLGPSFHKFD
AVGGLPPHGSFHPHDDRAPFMHNIHRLGAPPHLSERRPWGPQGLHEGGGPLGLPNFPGAP
QRRIPGFGGTQPAIVTNTTVEVVVPSSLVPVINGEDGECLKQIRQISDAKVTITEPKPGA
VETVIIISGTPEQTHAAQSLIQAFVMSETESS
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgtcggctccattgacgccttcgaagagaccacatgaggagagcgttacggagactaat
gggaaagggaagttgcagaagtctgaaaatttagattctaagctctccgctggcaatgtt
gctttccgggtgctgtgccctgcgtccaaagttgataatgtcactggtgaaggtggctct
gtcatatcacagatttttcaagaaactcttgtaaaggtcagagtcgaggaacctgttccg
ggatgcgatgaaagagttattatcgtgggttctgatagagagaatgatgttggtagcgag
catagaaaggaggacggcattgaagatgcaaatgtggatgaaaagcaagatgacgctaag
gcgccaagagagaaggatgaaactcaggaatctgttcctatcgaagattcaaaatctgat
actgaagattcagtaaccccatctttgcagaaggctctgcaacttgtatttgagagaata
gttgaaggggaaacggaaaccgatggaggggatgaagaaagtaataagtctttgacattt
gtttgtaggttactagtcctatcatctcaagtgggatgcctcttgggaaagggtggtagt
gttatcaaacaaatgtcatctgaaagtggggcacaaatccggatccttcccagggataaa
cttccattatgtgcttcagcttcggatgaactagtgcagattacggggaacattgatgca
gctaggaaagccattgaatctgtttcccagcagcttttggagaatctgcctcgcgatagt
gatgattcccttcccaccaccgggccatcatctaattcattcggtcaaccgcttccaaga
ccagaaatatatccaccacctaaccattctcaaggagctcctgatattgatcagcctgga
gattttgctgattcccattctgctgctcatcgattaaaccctaaattacatggaagtggc
atccctcgtaggatgaagccttctcaggaagtcctgactttccgcttattgtgccctgaa
gagagagtaggcggtgtaattggaaagggaggaaccataataaagacactcaagcaagag
acaggctgtgaaatcaaggttatggaaggcgtgcctgactcagacgatcgtcttattgtt
atatctggtcctgcgcacccagatgataggatatcacctgtccaagatgccgttattctt
gtgcaaagtaggatattcagggctatacctaatatcaaggaacaatccatgatggcgagg
cttcttgttttctctaatcaaattggttgtctccttggaaagggtggtgccatcattgca
gagatgagaaagttatctagggcacatatccgcataatggggaaggatcaaattccaaaa
tgcgcttcagttgatgaagaagttgttcagataaatggagaatttgaagctgttaaagat
gctcttctgcagatcaccactaggttgcggctgcacttttttggtgatgcatttccttct
ataaattatcatcaaaatcctgcgtttttggatcaaccaccatttcaatcatatctgagg
agggacttctcacctccaagaatgcattctaatttaggcccatcgtttcacaagttcgat
gctgttggtggccttccccctcatggtagttttcatcctcacgatgatcgtgctcctttt
atgcacaatattcataggttaggtgcccccccacatttatccgagagaagaccttggggt
ccgcagggactccatgaaggtggtggtccactaggcttgccaaactttccaggcgctcct
caaagaagaatcccagggtttggaggaacccaaccagctatagttaccaacaccactgtc
gaagttgttgtgcctagttcccttgttcctgttatcaatggagaagatggtgaatgcttg
aaacaaatacgtcagatttctgatgcaaaagttaccattactgagcccaagcctggagca
gttgaaaccgtgattataatatctggaacacctgaacaaacgcatgctgcgcagagcctt
attcaggcatttgtaatgagtgagactgaatcttcgtga
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