KEGG   Malus domestica (apple): 103441800
Entry
103441800         CDS       T03194                                 
Name
(RefSeq) suppressor of mec-8 and unc-52 protein homolog 1-like
  KO
K13111  WD40 repeat-containing protein SMU1
Organism
mdm  Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:mdm03041]
    103441800
Spliceosome [BR:mdm03041]
 Complex B
  Other components
   Complex B specific factors
    103441800
SSDB
Motif
Pfam: Beta-prop_WDR5 Beta-prop_THOC3 WD40 Beta-prop_WDR3_1st WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd EIF3I Beta-prop_EML_2 Beta-prop_WDR3_2nd WDR55 WD40_CDC20-Fz Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd Beta-prop_EML Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_WDR36-Utp21_1st ANAPC4_WD40 LisH_TPL NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR75_1st Beta-prop_TEP1_C Beta-prop_DCAF4 WDR90_beta-prop_4th Beta-prop_Aladin Beta-prop_IFT122_1st Beta-prop_ACSF4 Beta-prop_VPS8 Beta-prop_Nup120_160 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_SCAP Beta-prop_NWD2_C Ge1_WD40 Beta-prop_Vps41 Beta-prop_NUP159_NUP214 Beta-prop_SPT8 Beta-prop_WDR41 Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st WD40_RFWD3 Beta-prop_WDR35_TULP_N Beta-prop_WDR75_2nd Beta-prop_WDR19_1st DUF7165 Beta-prop_HPS5 VPS8_N Beta-prop_LRRK2 Beta-prop_IP5PC_F Beta-prop_IFT122_2nd zf_topless
Other DBs
NCBI-GeneID: 103441800
NCBI-ProteinID: XP_028963131
LinkDB
Position
08:complement(join(27653489..27653587,27654506..27654557,27654885..27654985,27655176..27655283,27655419..27655478,27655571..27655697,27656064..27656191,27657260..27657355,27657842..27657895,27657984..27658070,27658368..27658471,27659221..27659304,27659849..27659897,27660296..27660448,27661719..27661929,27662327..27662355))
AA seq 513 aa
MSTLEIEARDVIKIVLQFCKENSLHQTFQTLQSECQVSLNTVDSVETFVSDINSGRWDAI
LPQVAQLKLPRNKLEDLYEQIVLEMIELRELDTARAILRQTQVMGVVKQEQPERFLRLEH
LLVRTYFDPNEAYQESTKEKRRAQIAQALAAEVTVVPPSRLTALIGQALKWQQHQGLLPP
GTQFDLFRGTAAMKQDVDDLYPTTLSHTIKFGTKSHAECARFSPDGQFLVSCSVDGFIEV
WDYLSGKLKKDLQYQADETFMMHDDAVLCLEFSRDSEMIASGSQDGKIKVWRIRTGQCLR
RLERAHSRGVTSVSFSRDGSQLLSTSFDSTAKIHGLKSGKMLKEFRGHTSYVNDGIFTSD
GARVITASSDCTVKVWDLKTTDCLQTFKPPPPLRGGDASVNSVHLYPKNNDHIIVCNKTS
SIYVMTLQGQVVKSFSSGKKEGGDFLSACVSPKGEWIYCVGEDRNMYCFSHQSGNLEHLM
KVHEKEVIGISHHPHRNIVATYGEDCTLKLWKP
NT seq 1542 nt   +upstreamnt  +downstreamnt
atgtccaccttagaaattgaagctcgagatgtcatcaagattgtgcttcaattttgcaaa
gagaattctttgcaccaaacgtttcaaacattgcagagtgagtgccaggtatctttgaac
actgtcgacagcgttgagacgtttgtttctgacataaatagtggaaggtgggatgcaatt
ttgcctcaagtggctcaacttaagcttcccaggaacaaattggaggatttgtacgagcag
attgtactggaaatgattgaacttcgagaattggatactgctcgtgctatcttaagacag
actcaggtaatgggtgtagtgaagcaagaacaacccgaaagattcttgcgactagagcac
ctccttgtcagaacatattttgatccaaatgaggcttatcaagagtcaaccaaagaaaag
cggcgtgctcaaattgctcaagcacttgctgcggaagttactgtagtgccaccatcaaga
ttgacggctttaattggtcaggctctaaagtggcagcagcaccaaggattgcttccccca
ggaacacagtttgacttatttcgaggaacggctgctatgaaacaagatgtggatgacttg
tatccaacaactctttcacacacaataaagtttgggacaaaaagtcatgcagaatgtgcc
cggttctcaccagatgggcagtttcttgtctcttgctcggttgatggatttattgaggtg
tgggattacttaagcgggaaactcaagaaggatcttcagtaccaggctgatgaaactttc
atgatgcacgacgatgctgtcctctgtcttgaatttagccgagattcagagatgattgca
tctgggtcacaagatggaaagatcaaagtttggcgtattaggactgggcagtgcttgcgc
cgtcttgaacgtgcacattcacggggtgtcaccagtgtttccttctctcgggatggaagc
cagttacttagtacatcatttgacagcactgcaaaaatccatggcctaaaatctgggaag
atgttgaaagaatttcgtgggcatacatcttatgtaaatgatggaatctttactagtgat
ggagctcgcgtaattactgcatctagcgattgcacagtcaaggtctgggatttgaagact
acagactgtctacagacattcaagccacctcctcctttaaggggaggtgatgcttctgtg
aattctgttcatctttacccaaaaaataatgatcacatcattgtatgtaataagacgtca
tctatttatgtcatgacacttcaaggacaggttgtgaagagcttttcatctggtaaaaaa
gaaggcggagattttttgtcagcttgtgtgtcaccaaaaggggaatggatttactgtgtt
ggtgaagacaggaatatgtactgtttcagtcaccaatctggtaatttagagcatctaatg
aaggtccacgaaaaggaggtaattggcatcagccatcatcctcacaggaatattgtcgct
acatacggcgaagactgcacactgaagttatggaagccttga

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