Malus domestica (apple): 103441815
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Entry
103441815 CDS
T03194
Name
(RefSeq) uncharacterized protein
KO
K15707
E3 ubiquitin-protein ligase RNF170 [EC:
2.3.2.27
]
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mdm04121
]
103441815
Enzymes [BR:
mdm01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
103441815
Ubiquitin system [BR:
mdm04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103441815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF1232
RING_XB3-XBAT31
zf-RING_UBOX
zf-C3HC4_3
zf-C3HC4
zf-RING_2
zf-RING_5
zf-C3HC4_4
zf-C3HC4_2
Motif
Other DBs
NCBI-GeneID:
103441815
NCBI-ProteinID:
XP_008378747
LinkDB
All DBs
Position
08:complement(join(27830381..27830493,27830592..27830643,27830829..27830930,27831509..27831708,27833357..27833447))
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AA seq
185 aa
AA seq
DB search
MDGPPGGDLCSVCHGNFDTPCQANCSHWFCGNCIMLVWDHGSTVRPCKCPLCRRPITLLV
PSRASSRQLDRPEVAEILGKIERYNRVFGGHSRSLIQRGQDLPFLLRRLLRELINPDRSL
PLVIRARVWISMIMGAAYLFSPFDFIPEAIFGIAGLLDDFFIVLIVFFHVAAIYRSVLYR
RHGGS
NT seq
558 nt
NT seq
+upstream
nt +downstream
nt
atggacggccctccaggcggcgatctgtgttcggtgtgccatggcaacttcgacactcct
tgtcaggccaattgctctcactggttttgcggaaattgtattatgcttgtttgggatcat
ggatcaacagttcgcccttgtaaatgcccgctatgccgtcgtcccatcactttgttggtt
ccaagtagggcttcttcaaggcagcttgataggccagaggttgcggagattttaggcaag
atagaaaggtacaatcgtgtttttggaggtcattccagaagtcttattcagagagggcag
gaccttccttttctcctgcggaggctgctgcgagaactaattaatcctgatagatctctt
ccccttgttataagggctcgtgtctggatttcaatgataatgggtgctgcgtacctattc
agcccttttgacttcatcccggaagcaatatttggtatagctggtctcctggacgatttc
ttcatagtgctcatcgtcttcttccacgttgctgccatttatcggtctgtactctatcgc
cgccatggaggttcctga
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integrated database retrieval system
