KEGG   Malus domestica (apple): 103441980
Entry
103441980         CDS       T03194                                 
Name
(RefSeq) transcription initiation factor TFIID subunit 5
  KO
K03130  transcription initiation factor TFIID subunit 5
Organism
mdm  Malus domestica (apple)
Pathway
mdm03022  Basal transcription factors
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    103441980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103441980
   03036 Chromosome and associated proteins [BR:mdm03036]
    103441980
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIID
     103441980
   Coactivators
    SAGA/TFTC/STAGA complex
     103441980
Chromosome and associated proteins [BR:mdm03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    PCAF complex
     103441980
    STAGA complex
     103441980
    TFTC complex
     103441980
    SAGA complex
     103441980
    SLIK complex
     103441980
SSDB
Motif
Pfam: WD40 TFIID_NTD2 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML_2 Beta-prop_TEP1_2nd WD40_MABP1-WDR62_2nd WDR55 NBCH_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C Beta-prop_IFT122_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_WDR75_1st Beta-prop_EIPR1 WDR90_beta-prop_4th Beta-prop_WDR19_1st Beta-prop_SCAP Beta-prop_DCAF4 Beta-prop_HPS5 Beta-prop_SPT8 Beta-prop_Vps41 Beta-prop_Nup120_160 LisH PALB2_WD40
Other DBs
NCBI-GeneID: 103441980
NCBI-ProteinID: XP_070669201
LinkDB
Position
15:complement(join(2685551..2685604,2685692..2685767,2685848..2685943,2686021..2686290,2686425..2686504,2686669..2686745,2686852..2687013,2687102..2687141,2687221..2687290,2687377..2687487,2687910..2688058,2688182..2688283,2688646..2688755,2688837..2688924,2689026..2689082,2689176..2689273,2689406..2689484,2689587..2689668,2690410..2690600))
AA seq 663 aa
MAEAVDEESVRKFVAAYLKKKGFKQTENAFQDELNKNANSSWSPISFNSKLGSDVAKHIL
SFSQYEEGPAQYQDAYAKLRSWTYSSLDLYRHELLRVLYPVFIHCFMDLVAKGHNQEART
FFNSFREKHEMMHQRDLQKLEGVLSPSHLEEMEFAHSLRQSKVNIKICQYSYELLLQFLH
KSQSATVLGIINEHINFQVSPGQPSSISDDAEALTLTGSSLDSANQINQKEIHWGLLEDS
LEERLDKAGALDSERAEGESKEGDGDENKKKLSEGAKQGASNKKLKKDKAADAAKSARPE
ATPVTAVPRVKPELTLPVISAEVEQSILEDLRNRVQLSNAALPSVSFYTFINTHNGLNCS
SISHDGSMVAGGFSDSSLKVWDMAKIGQQGLDSLQVENGTTTSSEQVLSNGGKKPYTLFQ
GHSGPVYSATFNPLGDFILSSSADSTVRLWSTKLNANLVCYKGHNYPVWDVQFSPVGPYF
ASASHDRTARIWSMDRIQPLCVQWHVNCNYIATGSSDKTVRLWDVQTGECVRIFIGHRSM
VLSLAMSPDGRYTASGDEDGAMMMWDLSSGRCVTPLTGHTSCVWTLDFSGEGSLLASGSA
DCTVKLWDVTASTKLPRTEENKSGNTSGMRSLKTLPTKSTPVYSLRFSRRNLLLASGVLS
KTV
NT seq 1992 nt   +upstreamnt  +downstreamnt
atggccgaggcggtggacgaggagagcgtgcggaagttcgtggcggcttacttgaagaag
aaaggcttcaagcagaccgagaacgcttttcaagacgaactaaacaagaatgccaacagc
tcttggtccccgatttctttcaattccaaattgggctccgacgtcgccaagcacatccta
tccttctctcaatatgaggaaggtccagcacagtaccaagatgcatatgccaagttgagg
tcgtggacttacagttcactagatttgtacaggcatgagttgcttcgtgttctctatcca
gtatttattcattgttttatggatctggttgctaaaggtcataatcaagaagctcggaca
tttttcaacagcttccgtgaaaaacacgaaatgatgcaccaacgagatctacagaagttg
gaaggcgttctttctccctctcatttggaggagatggaattcgctcattctcttaggcag
agcaaagtcaacataaagatatgccaatactcgtatgagcttctgctgcagtttctacac
aagtcgcagtccgccacagtgcttgggattatcaatgagcatattaacttccaagtttct
cctggacaacccagttcaatttctgatgatgctgaggctctaacacttaccggaagtagc
ctggattcagctaatcagataaaccagaaggaaatacattgggggttgctcgaagattcc
ttggaagaacgcttggacaaggctggggccttagactctgaaagggcagaaggagaaagc
aaagaaggggacggggatgagaataagaaaaaattaagtgaaggagctaaacagggggct
tcgaacaaaaagttgaaaaaggacaaggctgctgatgcagcgaaaagcgcacgccctgag
gcaacccctgtaactgcagtaccaagagtcaaaccagagcttactttgccagtaatttcc
gcagaggttgaacagtctattcttgaagacttgagaaaccgtgtgcaattgagtaatgct
gcgctgccatctgtcagcttttatacattcatcaacacgcacaatggtttaaactgttcg
tctatatcccatgatggatccatggttgctgggggattttcagactcgtcgctgaaggta
tgggatatggcaaagattgggcaacaaggccttgattctttgcaggttgagaatggcacc
accacttcaagtgagcaagttctgtcaaatggtgggaaaaaaccatatactttgtttcag
ggtcattcagggccagtttattcagctactttcaatccccttggggattttattctttcc
tcttcggcagactcaactgttcggttgtggagcacaaaactaaatgcaaatcttgtttgc
tacaagggtcataattacccagtatgggatgttcagtttagccctgtaggtccttatttt
gccagtgcttcccatgatcgaacagcaaggatatggtctatggacagaattcagcctttg
tgtgtgcaatggcatgtcaactgcaactacattgccactggttcgagtgacaaaacagtt
cgattgtgggatgtacagactggagagtgtgtccgaatatttattggtcacaggagtatg
gttttgtctctggcaatgtcacctgatggccgttacacggcttctggtgatgaagatgga
gcaatgatgatgtgggacctttcaagtggccgctgtgttacacctttgacgggtcacacc
tcatgcgtatggacacttgatttcagtggtgagggttcgcttcttgcttctggatctgcc
gattgcactgtaaaactatgggacgtaactgcaagtacaaagttgccaagaactgaagaa
aacaaaagcggaaataccagcggaatgagatcattgaagactttgccgacgaagtctact
cctgtctattcgttacggttttctcgaagaaaccttctacttgcttccggggttctctca
aaaactgtataa

DBGET integrated database retrieval system