Malus domestica (apple): 103442009
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Entry
103442009 CDS
T03194
Name
(RefSeq) septin and tuftelin-interacting protein 1 homolog 1-like
KO
K13103
tuftelin-interacting protein 11
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103442009
Spliceosome [BR:
mdm03041
]
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
103442009
Other components
Complex C specific factors
103442009
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GCFC
TIP_N
G-patch
G-patch_2
BBS7_hp
Motif
Other DBs
NCBI-GeneID:
103442009
NCBI-ProteinID:
XP_028963308
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All DBs
Position
08:complement(31083421..31086048)
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AA seq
875 aa
AA seq
DB search
MDDYQEMERFGMEKDYEDGQWIGGEFYYRKRKDKRVQTKDDVLYGIFTADSDDDDNDGPR
KRRKDRKVDLTKPVSFISTGIVMPNQEVDDNSRQQNDDNRPGLGATIGLGFGAATGSGLG
FKIPNLDPLGGEEDDDDEQSFLPTAFGKKIKEGAERRHKERERLKLLKQTSSQSQGRGGS
EEGQFAGLGAKGGGDGGLGAFEKHTKGIGMKMLKNMGYKGGGLGKNEQGILAPIEAKLRP
KNMGMGFNDYKETEVKRPSLQELEAEKPSKPLPDATSAKKKPSWKKRAAANKTDKDQYVS
AKELLAQKQEEGTDVLVHKVVDMRGPQVRVLTNLENLNAEEKAREEDVPMPELQHNVRLI
LDLAELDIQKIDRDLRIERDTAISLNQEKERLETEVARQKQHLDSLEDIRTVLDRLGEEN
SMGTLTLDSLTKGFGDLQKRYADDYKLCNLSCIACSFALPLFIRMFQGWNPLRNPSHGLD
LVSSWKALLHGEGEREQYLDIWDNSMSPYTQLLSEVVVPAIRIAGVNTWQPKDPEPMLRF
LESWEKLLPPSVLHSILDMVIFPKLKDAVDLWEPHRDTVPIHVWVHPWLPFLGHKLEDLY
HTIRFKLSNVLGAWHPSDGSAYTILSPWKKVFDAASWEQLMYRFIVPKLQLVLQEFQVNP
ADQTLDQYNWVMSWASAIPIHLMVDMMEKFFFTKWLQVLYHWLCSNPNFEEVLNWYKGWK
ELIPEELHANESIRYQLNCGLDMMNRAVEGMEVVQPGLKENISYFRVLEQRQFEAHQKAA
AAAQANLGGTAQMDGIGHEMNLKDVIEAHAQQHGLLFRPKPGRMHNGHQMYGFGNVSIIV
DSLNQKVYAQTEETWSLVSLERLLDMHKNSLKRRR
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atggacgattatcaggagatggagaggtttggaatggagaaggattacgaggacggccag
tggatcggtggggagttctattaccgcaagcgcaaggacaagcgcgtccaaaccaaagac
gacgtcctctacggcatattcactgccgattccgacgacgacgacaacgacggccccaga
aaacgcaggaaagaccgaaaggtcgacctcaccaagcccgtcagtttcatctccaccgga
atcgtcatgcccaaccaggaggtcgacgacaattcaaggcagcaaaacgatgataaccgg
cctggcctcggcgccaccattggcctcggctttggtgccgctaccggttccggtttaggt
tttaaaattccgaatttggatccgttggggggcgaggaggatgacgacgacgagcagagt
tttttgccgacagcgtttgggaagaagataaaggagggagcggagaggagacacaaggag
agggaaaggctgaaattgctcaagcagactagtagtcagtctcagggtcgaggaggttct
gaagaaggccaatttgcaggattaggagcaaagggcggcggggatgggggtttgggggcc
ttcgagaaacacaccaagggcattggaatgaagatgcttaagaacatgggctacaaagga
ggcggacttgggaagaacgagcaaggcattctcgctcctattgaagccaagttgaggcca
aagaatatgggcatgggtttcaatgattacaaggagacggaagtcaagcggcctagcttg
caagaattggaagctgaaaagccgagcaagcctttgccggatgcgacctccgccaaaaag
aagccttcctggaagaagagggccgctgccaacaagactgacaaggaccagtatgtctct
gccaaggagttgttagcccagaagcaggaagagggcaccgatgtccttgtgcacaaggtg
gttgatatgcgaggacctcaggttcgagtcttgaccaatctggagaatttgaatgccgaa
gagaaagccagggaagaggatgttcccatgcccgagctacagcacaacgtcaggttgatt
ctggacttagctgagcttgatatccagaagattgacagggacctgaggattgagcgggac
acggccatcagcttgaaccaggagaaagagaggttggagacggaggtggccaggcagaag
caacacctggatagcttggaggatattaggaccgtcttggatcgactgggagaagagaat
agcatgggaacattgacgctggactccctgacaaagggctttggtgacctgcagaagaga
tacgctgatgactataagttatgtaacctgtcttgcattgcctgctcctttgctctgcct
ctgtttattaggatgtttcagggctggaatcctcttaggaacccctcgcatgggttggat
ttagtatcttcttggaaggctttgcttcatggagagggggaaagagagcagtacttggat
atttgggataactcaatgtccccctacacccaattgctttccgaggttgtagtacctgcc
attaggattgctggcgtgaatacatggcagcccaaggaccctgaacccatgcttcgcttt
ctggagtcctgggagaaattgctgcctccttctgtccttcattccatattggatatggta
atctttcctaaattgaaggacgcagttgacttgtgggaacctcaccgggacactgttccc
atccatgtgtgggtgcatccgtggctaccattcttgggacacaagttggaagacttgtat
cacacaatacgattcaagttgagtaatgttctgggtgcttggcacccaagtgatggatct
gcctatactatactctcaccgtggaagaaggtgtttgatgctgcgagttgggaacagctt
atgtatagatttatagtacccaagttgcagcttgtcttacaagaattccaagtgaaccct
gcagatcagacgcttgatcaatataattgggtgatgagttgggcttctgctattccaatt
catctaatggtagatatgatggagaaatttttcttcaccaagtggctacaggttttgtat
cactggttatgttcaaacccgaactttgaagaggttttaaattggtataaaggttggaag
gaactcattccagaggagcttcatgctaatgaaagtatccggtatcagcttaattgtggt
cttgacatgatgaatcgggctgttgagggtatggaggtggtccaacctggtttgaaggag
aatattagctactttagggtgcttgagcaaaggcaatttgaggcacatcagaaagcagca
gcagcagcacaggcaaacttgggtggtactgctcaaatggatggcattggtcatgagatg
aatttgaaagatgttattgaggcccatgcgcagcagcatggcctgctatttaggcctaag
cctgggaggatgcataatggtcatcagatgtatggctttggtaatgtaagcataatagtt
gactctctaaatcaaaaggtatatgcccaaacagaggaaacttggtcccttgtatccctt
gaaaggttgctggacatgcacaaaaattcacttaaaaggagacgctga
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