KEGG   Malus domestica (apple): 103442024
Entry
103442024         CDS       T03194                                 
Name
(RefSeq) DNA-directed RNA polymerase I subunit 2
  KO
K03002  DNA-directed RNA polymerase I subunit RPA2 [EC:2.7.7.6]
Organism
mdm  Malus domestica (apple)
Pathway
mdm03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mdm00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103442024
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mdm03021]
    103442024
Enzymes [BR:mdm01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103442024
Transcription machinery [BR:mdm03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     103442024
SSDB
Motif
Pfam: RNA_pol_Rpb2_6 RNA_pol_Rpb2_1 RNA_pol_Rpb2_3 RNA_pol_Rpb2_7 RNA_pol_Rpa2_4 RNA_pol_Rpb2_2 GxGYxYP_N CSPP1_C
Other DBs
NCBI-GeneID: 103442024
NCBI-ProteinID: XP_028963223
LinkDB
Position
08:complement(join(29921470..29921880,29921998..29922249,29922364..29922576,29922696..29922830,29923182..29923304,29923982..29924057,29924155..29924258,29924731..29924805,29924929..29925093,29925377..29925541,29925643..29925884,29927477..29927556,29927653..29927780,29927993..29928108,29928253..29928337,29929082..29929199,29929364..29929437,29929559..29929611,29929694..29929874,29930872..29930917,29931023..29931100,29932370..29932440,29932805..29932868,29933001..29933077,29933369..29933491,29933589..29933668,29933805..29934126))
AA seq 1218 aa
MYEASATSVKQNPFFFLLLLSFFPSFLSSSLNSERTIRKMTSSEREEKPTKMFGKQLAAA
EDFAAVRELFRHHIESFDYLVTKGLEVLLSKIKPIEIVDPSTNNTLTIWLGDPALYRPYK
EESKMMQVPLLPFECRQAKLSYTGKFMAEVCFKYNDSGAVIREKFNFGQLPIMLQSKLCH
LRGATPQKLVSYKEEASEMGGYFILNGLERVVRLVILPKRNYPTSMVRNSFRDRKEGYTD
KAVVIRCEREDQSSVTVKLYYLRNGSARLGFWIQGREYLLPVGVVLKALIDTTDREIYEC
LTCCYVENYEKGKGAVGTQLVGERAQIILDEVRDLKLFTRHECLEHIGEHFRPLMGGLEN
ERPSVVGDAVIMNYILVHLNKAHDKFNLLIFMVQKLFSLVDQTSVLDNPDSLQNHEVLLP
GHLITIYLKEKLEEWLQRTKKIIEDEINKNKDFDFCNVAKVKKLMDKNPAKQISLAVENM
LKTGRLNTQSGLDLQQRAGLTVQAERLNYLRFISHFRAVHRGASFAGLRTTSVRKLLPES
WGFLCPVHTPDGEPCGLLNHMTHICRITSFFDAQGNIRDFSKIRESILSVLSAVGMKTSK
PNLVQAGPPAAFSVLLDGCVVGSISSSKVEKVVAHLRRLKVSAAPVIPEDLEVGYVPLSM
GGAYPGLYLFTIPSRFVRPVKNISIPSIEGQNIELIGPFEQVFMEIRCPDGRDGGRKDGF
PATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSLQGLCNRADQKLYHL
QTPQSPIVRTSAYKKYCIDEYPTGTNAIVAVLSYTGYDMEDAMILNKSSVERGMFHGHIY
QTETIDLSDQKKRSDNTPTYFKKSNVDKNPLIDSDGLPHVGQTIKPYEEYYSFTNDTLHK
PRAVKRKGTEPVIVDYVAIDGKKLLQKANIRFRHTRNPIIGDKFSSRHGQKGVCSQLWPD
IDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSLHGNYVDATPFASSKNANG
ETGPKSKTLVDELGEMLKVKGFNYHGVEVLYSGVYGTELTCEIFIGPVYYQRLRHMVSDK
FQVRSTGTVDQVTRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLHDRLHTCSDYHIADV
CSICGSILTSTFIQPKRVGRAVSGIPSVRAPKKVICHACKTSKGMETVAMPYVFRYLAAE
LASMNIKMTLQVSNAAKD
NT seq 3657 nt   +upstreamnt  +downstreamnt
atgtatgaagcctctgcaacctctgttaaacaaaaccccttcttctttcttcttcttctt
tccttctttccttctttcctttcctcttcactgaacagcgaacgaaccatcagaaagatg
acatcgtcggagagagaagagaagccgacgaagatgttcgggaagcaattggcggcagcg
gaggacttcgcggcggtgcgtgagctcttccgccaccacatagagtcattcgattacctt
gtcactaagggtctcgaggttctactcagcaagatcaagcccatcgaaattgtcgaccct
tccaccaacaatacgcttacaatctggttgggtgaccctgcgttgtaccgaccttataag
gaagagtcgaaaatgatgcaagttcctctgctgccttttgaatgtagacaggctaaactt
tcctacacggggaaattcatggcagaagtttgctttaagtataatgatagtggagctgtt
ataagagaaaagttcaattttgggcagcttcccatcatgctacagtcaaagctttgccac
ttaagaggtgctactccccaaaagctagtttcttacaaagaagaggcatcggaaatgggt
ggttacttcattttaaatgggcttgagagagtggttcggcttgttatattgccaaagcgg
aactatccaactagtatggtgcgaaattcatttcgtgatcgaaaggaaggatatactgac
aaagcagttgtaataagatgtgaaagagaagatcagtcttcagtaactgtcaaattgtat
taccttcgtaatggaagtgcaagactgggattttggatacaagggagggagtacttgctt
cctgtaggcgttgtcttaaaggctctcattgatactactgatcgtgaaatttatgagtgt
ttgacatgttgctatgtcgagaactatgagaaaggaaaaggggctgttggcactcagcta
gtgggtgagagggcacaaattatcctggatgaagtgagagacttgaaacttttcactcgt
catgaatgtctagagcacattggagaacacttccgacctcttatgggtggattggagaat
gaacgaccttcagttgttggggatgctgttataatgaattacatattggtccaccttaat
aaggctcatgacaaattcaatctgctcatatttatggtgcagaaacttttttcacttgtg
gatcagacttctgtgctggacaacccagattccttgcaaaatcatgaagtcctactccct
ggtcatttgattacaatatatcttaaggaaaaactagaagagtggttgcagaggacaaaa
aagattattgaagatgagatcaacaaaaataaggactttgatttttgcaatgtagctaaa
gtaaagaagcttatggataaaaatcctgcaaagcagatcagtttagccgttgaaaatatg
ttgaaaactggaagacttaatactcaatctggtctagatttgcagcagagggcaggcttg
acggttcaggcagagaggcttaactatttacgtttcatatctcattttcgtgctgttcat
cgaggggcatcattcgctggacttcgcaccacaagtgtgcgaaaattgttacctgaatct
tggggttttctttgccctgtccatacacctgatggtgaaccatgtggcttgttgaatcat
atgactcacatttgtagaattacatccttctttgatgctcaaggaaatattagagacttc
tcaaagatccgagagtctattctaagtgttctgagtgcagttggaatgaagacttcaaag
ccaaatctggttcaagctggtcctcctgcggctttttctgttttgttagatggctgtgtt
gttggttctatatcttccagtaaagttgagaaagttgtggctcatttaaggaggctgaaa
gtgtcagctgctccagtgattcctgaggatctggaagtgggatatgttccgttaagcatg
ggtggagcatatcctggtctgtaccttttcactatcccttctagatttgttcggccagta
aagaatatttcaattccttccattgaaggtcagaatattgaacttattggaccctttgaa
caggttttcatggaaataagatgtcctgatggtcgagatggtggaaggaaagatggtttc
ccagccactcatgaagaaattcatccaactggaatgctcagtgtggtcgctaatcttaca
ccctggtcggatcataatcagagcccacgaaatatgtatcagtgccagatggcaaaacaa
acaatggccttctctttgcaaggactttgcaatcgtgcagatcaaaagttgtaccatctt
cagactcctcagtcccctattgtacgcacaagtgcatataagaagtactgcatcgatgaa
tacccaacaggcacaaatgcgatcgttgctgtactgtcatatactggatatgatatggag
gatgccatgattctaaataagtcatctgtcgaacgcggaatgtttcatgggcatatatat
cagacagaaacaattgacttgtctgatcaaaagaagaggtcggataacaccccaacatat
tttaagaaaagtaacgtcgataaaaatcctttgattgattcagatggtcttcctcatgtt
ggtcagacaataaaaccatatgaagaatattatagctttacgaatgacactcttcataag
cccagagccgtcaaacggaaaggtacagaacctgttatagttgactacgttgctattgat
gggaagaaactcctccagaaggcaaacatacgctttcgacacactagaaaccccatcatt
ggtgataaatttagcagccggcatgggcaaaaaggtgtttgctcccagttgtggcctgat
attgatatgccattttctggggttacgggcatgcgtccagatctaatcatcaatccccat
gcatttccttctagaatgacaatagctatgctgttggaatcagttgctgcaaagggcggt
agcttacatggaaactatgttgacgcgactccatttgctagttcaaagaatgctaatgga
gagactggaccaaaatccaaaacccttgttgacgaacttggtgaaatgttaaaggttaaa
gggtttaactaccatggtgtagaagttctgtacagcggggtttatggcacagaactcacg
tgcgagatctttattggccctgtttattatcaacgactacgacatatggtttcagacaaa
tttcaggttcgctccactggaacggtagaccaggtcactcgccagcctatcaaaggacga
aagcgaggtggtggcatacgttttggtgaaatggagcgcgactccatgcttgcgcatggg
gcagcatatctgttgcacgacaggcttcatacctgttctgattatcacattgccgatgta
tgttccatatgtggaagcatcctaacgtccacattcatccaaccaaaacgggttgggcgt
gcggtttcaggaattccgtctgtaagagctcccaagaaggtcatctgccatgcttgtaag
acaagtaaagggatggaaacagttgcaatgccctatgtcttcagatatttagctgcagag
ttggcgtcaatgaacataaaaatgactcttcaggtaagtaatgcagcgaaagattga

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