Malus domestica (apple): 103442360
Help
Entry
103442360 CDS
T03194
Name
(RefSeq) polypyrimidine tract-binding protein homolog 1-like isoform X1
KO
K14948
polypyrimidine tract-binding protein 2
Organism
mdm
Malus domestica (apple)
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mdm03041
]
103442360
Spliceosome [BR:
mdm03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
103442360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_8
DUF4523
Motif
Other DBs
NCBI-GeneID:
103442360
NCBI-ProteinID:
XP_008379363
LinkDB
All DBs
Position
09:complement(join(3431333..3431806,3432027..3432139,3432226..3432307,3432396..3432500,3432601..3432658,3433504..3433599,3433713..3433786,3433879..3433941,3434385..3434594,3434936..3435118))
Genome browser
AA seq
485 aa
AA seq
DB search
MSTSGTPQFRYTQTPSKVLHLRNLPWECAEEELIELCKPFGKIVNTKCNVGANRNQAFVE
FADLNQAINMVSYYASSSEPAQVRGKTVYIQYSNRHEIVNNKSPGDVPGNVLLVTIEGVE
AGDVSIDVIHLVFSAFGFVHKIATFEKAAGFQALIQFSDAGTASMARNALDGRSIPRYLL
PEHVGSCHLRISYSAHTDLNIKFQSHRSRDYTNPLLPVNPTAIEGIMQPTVGPDGKKKEL
ESNVLLASIENMQYAVTVDVIHTVFSAFGTVQKIAIFEKNGQTQALVQYPDLNTAAVARE
ALEGHCIYDGGYCKLHLSYSRHTDLNVKAYSDKSRDYTIPDASLLAAQQVSGYTPPPPGA
WQNPQAAPMYQGNEYSGAASVQAQAPPGPPGQPSSWDPAMQAGRSTFVSAPSTFPGQTYQ
ASSGPVYYSAAMPAGSSPLQSGPTASGMGSRGMPQPGVPPNARPGGGASSPGVRPPGASP
SYYGQ
NT seq
1458 nt
NT seq
+upstream
nt +downstream
nt
atgtcgacatcgggtacgccgcagttccggtacacgcagacgccgtcgaaggtgctccac
ctccgcaatctcccgtgggagtgcgccgaggaggagctcatcgagctctgcaaacctttc
ggcaagatcgtcaacaccaagtgtaatgtcggcgccaatcgcaatcaggccttcgtcgaa
ttcgcagacctaaaccaggccataaatatggtttcgtattatgcttcatcctcggagcct
gcccaggtccgtggtaaaaccgtttacattcagtattcaaatagacatgaaattgtcaac
aacaaaagtccgggagacgtacccggaaatgtcttgttggtaaccatcgagggtgttgaa
gccggcgatgtgagcattgatgttattcacttggtgttctctgcttttggctttgttcac
aagattgccacttttgaaaaagcagctggcttccaggcattgattcagttcagtgatgct
ggcactgcatctatggcaaggaatgcgttggatggaagaagcatacccaggtacttgctt
ccagagcatgtcggttcctgccacttacgtatttcttattcggcacacactgatctgaac
atcaagttccagtctcaccgaagcagggactatacaaatccgctccttcctgtaaatcct
actgcaatagagggaattatgcagcctactgtaggtcctgatggaaagaagaaagagctg
gagagtaacgtgcttcttgcttcaattgaaaatatgcaatatgctgtcacagtggatgtt
attcacacggtgttctctgcgtttggcactgtccaaaaaattgctatattcgagaagaat
ggtcaaacacaagcattagttcaataccctgatctcaatacagcagcagttgccagagaa
gctctagagggacactgcatttatgatggtggctattgtaagcttcatctatcatactct
cgtcatactgatctcaatgtaaaggcgtatagcgacaaaagtagagactatacgatccca
gatgctagtttgcttgcggcgcaacaagtttctggttacactcctcctcctcctggtgct
tggcagaatcctcaagctgctccaatgtaccaaggcaatgagtacagtggtgcagcttct
gtgcaggcccaagctcctccaggtcctccaggacaaccctcatcatgggatccagccatg
caggcaggcagatcaacgtttgtttcggctcctagcacctttcccggtcaaacataccag
gcatcatccggtcctgtatattactctgcagcaatgccagcgggttcttcgcctctccaa
tcaggtccaactgcttcaggtatgggttctaggggaatgcctcagccaggggttccaccc
aatgcgcgacctggtggtggtgcttcatctccaggggttcggcctcctggtgcctcacca
tcgtactacggccaatag
DBGET
integrated database retrieval system
