Malus domestica (apple): 103442408
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Entry
103442408 CDS
T03194
Name
(RefSeq) transcription initiation factor IIB-2-like
KO
K03124
transcription initiation factor TFIIB
Organism
mdm
Malus domestica (apple)
Pathway
mdm03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
103442408
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mdm03021
]
103442408
Transcription machinery [BR:
mdm03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
103442408
Prokaryotic type
Archaeal type
TFB
103442408
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
zf_PCFS4
Motif
Other DBs
NCBI-GeneID:
103442408
NCBI-ProteinID:
XP_008379413
LinkDB
All DBs
Position
09:complement(join(4317548..4317684,4318075..4318894))
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AA seq
318 aa
AA seq
DB search
MEAKEFCRDCKQETDVVSDHRSGDTICTFCGLILEARYIDERAEWRNFADQNPEEDRTRV
GKASDPLLDNGVLSTCIFKEKKKNNKKGTDADGNFPPNKWTNRAVNPSNSLLKSFKYLEE
MADRLDIYEGVPKCILDHAKGLYKKADDKNFCKGRNSNPIMAACLLLAFEESPNTRTLKE
ITMVANGPSKKEISKMKEELKRSLGIASKIKSAMDLWPRHCSNLGMSSKDKKAVEEALKN
LANFDIRRNPNSVVAAVMYMVVQLSNGNNCSVQDVSKAADGVAVGTTKRTYKDIYPYASQ
IIPTWFCRLEDLKKLITP
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggaagctaaagagttctgtagggactgcaagcaagagacagacgtcgtgtccgaccac
aggtcgggtgacacaatctgcaccttctgtggtttgatcctcgaagcccgctacatcgat
gaaagagccgagtggcgaaattttgccgatcagaaccctgaagaagaccggactcgcgtc
ggaaaagcctccgatccgttgctggataatggtgttctttccacttgtatattcaaagaa
aagaagaaaaacaacaagaagggtactgatgccgatggtaattttcctcctaataaatgg
accaacagggctgtaaaccctagcaattctctcctaaaatctttcaagtacctcgaagag
atggccgaccggctagacatatacgaaggcgttccgaaatgcatactggatcatgccaaa
ggtttatacaagaaggccgatgataagaacttctgtaaggggagaaattctaaccccata
atggctgcttgcctcttgcttgcgtttgaagaaagcccaaatacgcgaacactaaaggaa
atcaccatggttgccaatgggccatctaaaaaagaaatcagcaagatgaaagaagagttg
aagagaagcctagggattgcttccaagatcaaaagcgccatggacctttggccgcgacat
tgttcgaatcttggtatgagtagtaaagataagaaggctgtggaagaagccctgaagaat
ttggcaaattttgatattaggagaaaccctaattctgttgtggcagcggttatgtacatg
gtagttcagctttctaatgggaataactgttctgttcaagatgtctcaaaggcagctgat
ggtgttgctgtagggacaactaaaaggacatacaaggatatttatccctatgcttcacag
ataataccaacctggttttgcaggttggaggacctcaagaaacttatcactccttga
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integrated database retrieval system
