Malus domestica (apple): 103442630
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Entry
103442630 CDS
T03194
Name
(RefSeq) serine/threonine protein phosphatase 2A 59 kDa regulatory subunit B' gamma isoform-like
KO
K11584
serine/threonine-protein phosphatase 2A regulatory subunit B'
Organism
mdm
Malus domestica (apple)
Pathway
mdm03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103442630
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mdm01009
]
103442630
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103442630
03036 Chromosome and associated proteins [BR:
mdm03036
]
103442630
Protein phosphatases and associated proteins [BR:
mdm01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103442630
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103442630
Chromosome and associated proteins [BR:
mdm03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103442630
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B56
Motif
Other DBs
NCBI-GeneID:
103442630
NCBI-ProteinID:
XP_008379656
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All DBs
Position
09:complement(join(8097436..8097819,8098691..8099926))
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AA seq
539 aa
AA seq
DB search
MIKNIWGKIPRKPSKSSQSDAYSDGGANGNGPNSSHSSKSSSSSSKFSNLGSGNSRSSNG
VLTSHSSGGVKSNHSKKSAPLATQAGPLLSSGAYEALPSFKDVPSSERQNYFFKKLNMCC
VVFDFNDPSKNLKEKDVKRLTLLELVDYISSVTSKFNEVAMQEITKMVATNLFRTFSSSN
LDNKGPEIYDQDEEDQMLEPAWPHLQIVYECLLRFVASPEIDAKLAKRYIDHSFVLKLLD
LFNSEDQREREYLKTILHRIYGKFMVHRPFIRKSINNIFFWFIFETEKHNGIAELLEILG
SIINGFALPLKEEHKLFLVRALIPLHKPKCVSMYHQQLSYCISQFVEKDAKLADTVIRGL
LKYWPITNSSKEVMFLGELEEVLEATQPSEFQRCMVPLFRQIGNCLNSSHFQVAERALFL
WNNDHIRNLVTQNRQVILPIIFPALEKNTRSHWNQAVQSLTLNVKKIFSDVDQELFDECL
VGFQEDESKEKETQEKRESTWKRLEDVAASKALGNEAVLVSGFTSSIDTNPQPRASSGS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaaatatatggggtaaaataccccggaaaccctcgaaatcatcgcaaagcgat
gcgtatagtgacggaggggcaaatgggaatggcccaaattcatcccacagctcaaaatcg
agctcttcttcgtcaaaattttcgaatttgggttcgggcaattctcgttcgagcaatggg
gttcttacctcgcactcctcgggcggggttaaatcgaatcactcaaagaaatcagctccc
cttgcaactcaagcaggtcctttgttgtcatcgggtgcatacgaggctctgccgagtttc
aaggatgttccaagttcagaaaggcagaattatttttttaagaagttgaatatgtgttgt
gtggtttttgattttaatgatccctcgaagaatctcaaggagaaggacgtcaagaggcta
actttacttgaacttgtagattacatttcatcagtaacatcgaagttcaatgaggtggca
atgcaagagattacaaagatggtggcgaccaatctgtttcgtacattttcgtcttccaat
cttgataacaagggtcctgaaatttatgaccaagacgaggaggaccaaatgttggaacca
gcttggcctcatctgcagattgtgtatgaatgtctattaagatttgtggcttctccagag
atcgatgccaagctagctaaaagatatattgatcattcatttgtgttgaagttgcttgat
ttgtttaactctgaggaccaaagagagagggaatacctaaagacgattctccatcgcatt
tatgggaagttcatggtgcatcgaccgttcattaggaaatccattaacaacatcttcttt
tggttcatttttgagactgagaagcacaatgggattgcggaattgcttgaaatcttaggc
agcataatcaacggttttgctttgcctttgaaggaagagcacaagctgttccttgttcgt
gccttgattcctcttcacaagcccaagtgtgtatctatgtaccatcagcaactctcatat
tgcattagtcagtttgtggagaaagatgccaagctggcggatacagtgattcgaggactt
ttgaagtattggcccataacgaatagttcaaaggaagttatgttccttggtgaattggaa
gaggttctggaagctacccagccatcagaatttcagcgctgcatggtccccttattccgt
caaattggtaactgcctaaacagctcacattttcaggtagctgaacgtgcattgtttttg
tggaataacgatcacataagaaatttggtcacacagaatcgccaagtgattctgccaata
atcttcccagccctggagaaaaacacacggagtcattggaatcaagctgttcagagtttg
acactgaatgtgaaaaagatattctcagatgttgatcaagaactctttgatgagtgcttg
gtcggcttccaagaagatgaatccaaagagaaagaaacacaggagaaacgtgaatcaacg
tggaaacgcttagaagatgtggctgcctccaaggctttgggcaatgaggctgtgcttgtc
tcaggatttacttcctccattgatactaacccacaaccacgggcttcttcaggtagttga
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