KEGG T03194: 103442664

Malus domestica (apple): 103442664

Entry

103442664         CDS       T03194

Name

(RefSeq) protein argonaute 16

K11593

eukaryotic translation initiation factor 2C

Organism

mdm Malus domestica (apple)

Brite

KEGG Orthology (KO) [BR:mdm00001]
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mdm03019]
    103442664
   03036 Chromosome and associated proteins [BR:mdm03036]
    103442664
Messenger RNA biogenesis [BR:mdm03019]
Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     103442664
Chromosome and associated proteins [BR:mdm03036]
Eukaryotic type
  Gene silencing
   RISC (RNA-induced silencing complex)
    103442664
   RNA interference (RNAi) pathway
    RITS (RNA-induced transcriptional silencing) complex
     103442664
   microRNA pathway
    RISC loading complex
     103442664

SSDB

Motif

Pfam:

Piwi ArgoN PAZ ArgoL1 ArgoL2 ArgoMid

Other DBs

NCBI-GeneID:

103442664

NCBI-ProteinID:

XP_008379694

LinkDB

Position

09:join(8402015..8402236,8402320..8402525,8402625..8402822,8402916..8403052,8403146..8403243,8403331..8403428,8403513..8403684,8403806..8403922,8404006..8404113,8404246..8404308,8404436..8404549,8404635..8404800,8404883..8404995,8405082..8405219,8405307..8405437,8405637..8405702,8406146..8406209,8406574..8406685,8406762..8406835,8407153..8407247,8407347..8407378,8407504..8407679)

AA seq 899 aa
MEDVASAGIADGELQPAPPSPTIPPKLKPEVVTPSKYSIMSRRGTGTTGKEINLLANHFK
VSVNVPDAVFYQYSVSITSEDKKVVEGKGIGRKLIDRLYQTYSSELGGKKFAYDGEKALY
TVGPLPQNKLEFTVVLEETFAKHENGSTNGTEKRSRRSFRSRTFNLEISYAAKIPLKPIS
LVLEGADVENTQDSLRVLDIILRQQAANRGCLLVRQSFFHDDSRNFTDVGGGVKGVRGFH
SSFRPTQGGLSLNMDVSTTMILTPGPVIDFLLANQDVREPRYIDWVKAKRMLKNMRINAR
HRNMEFKIIGLSEKPCNQQYFPMKLKIGDNGTSEDQTVEITVYEYFTKHCGVEITSSQYM
PCLDVGKPKRPNYLPLELCSLVSLQRYTKALSSKQRASLVEKSRQKPQERIRTVTDAMKK
YQYDDDPVLATCGISINKELTQVKGRVLETPKLKVGNSDDCIPRNGRWNFNNKTLLNPTR
IDRWIVVNFSARCDTSHLSRELINCGRKKGIIIERPFTLIEEDPQCRRLTPVARVDKMFE
QILAKLPGEPQFILCVLPEKKNSDIYGPWKKQSLTEFGIATQCISPTKISDQYLTNVLLK
INTKLGGINSLLAIEHSSRVPLVKDTPTMILGMDVSHGSPGRSDIPSVAAVVSSRSWPLI
SRYRAAVRTQSPKMEMIDALYKPLENGTDAGIIRELLVDFYKTSNGRKPTQIIVFRDGVS
ESQFNQVLNIELDQIIKAYQHLGEVNVPKFTLIIAQKNHHTKLFQQGSPDNVPAGTVVDT
EIVHPRNYDFYMCAQAGMIGTSRPAHYHVLVDEIGFSPDDLQNLIHSLSYVYQRSTTAIS
IVAPICYAHLAAAQVGQFMKFEDLSETSSGKGSVTSSESVPVPELPKLHENVQGSMFFC

NT seq 2700 nt +upstreamnt +downstreamnt
atggaggatgtagctagtgctggaattgcagacggggaactacaaccggccccaccctct
ccaaccataccacctaaattgaagccagaagtagtgactccttcaaaatattctatcatg
agtaggcgtggaactggaactactgggaaagagataaatttgcttgcaaatcacttcaaa
gtttctgtgaatgttccagatgctgtattttaccagtattctgtttctattacttcagaa
gataagaaagttgttgaaggcaagggaatcgggagaaaacttattgacaggctttatcaa
acatactcttcagaacttggtggtaaaaagtttgcatacgatggggagaaagcactgtac
acagtgggtcctctgccacagaacaagcttgagttcacggttgttctggaggaaacgttt
gcaaagcatgaaaatgggagcaccaatgggaccgaaaaacggtcaagacgttcttttcgg
tcaagaactttcaacttagagataagttatgctgccaaaatacctctgaaaccaatttct
cttgtcctcgagggagccgatgtagaaaatacgcaagattcacttagagtgcttgatatt
attctgcggcagcaagcagctaacaggggttgccttctagtacgacagtcattcttccat
gatgactctagaaactttactgatgttggaggaggtgtaaaaggtgttcggggatttcat
tctagttttcgtccaactcagggtggcttatccttgaatatggatgtatctacaacaatg
atcctaacacctggacctgtgattgattttctgttagctaaccaggatgtaagagaacct
cgctacatagactgggtaaaggcgaagagaatgctgaaaaatatgaggattaatgcaaga
caccgtaacatggaattcaaaataataggcttaagtgagaagccatgtaatcagcaatat
tttcctatgaagttaaaaattggtgacaatggcacgagtgaggatcagactgtggagatt
actgtttatgagtatttcactaaacactgtggtgtagaaatcacctcttctcagtacatg
ccatgccttgatgttggcaagcccaagaggcctaactatctgcctctggagctttgttcg
ctagtttcgcttcagcggtatacaaaagcattatcttcaaagcagagggcatccttagtt
gaaaaatcaaggcagaagcctcaggaaagaataagaactgtgactgatgctatgaaaaaa
taccagtatgatgatgatcctgtgcttgctacatgtggtatttctataaataaggaattg
actcaggtcaagggccgtgttcttgagactccgaagttaaaggttggtaacagtgatgat
tgcatcccccgtaatggacgatggaacttcaacaacaagacactgctaaaccctactcgc
attgaccgttggattgttgtcaacttctctgcacgctgtgataccagtcacctctcacga
gagcttatcaactgtgggaggaagaagggcattattattgagcgcccctttacattaatt
gaggaagatccacaatgcagaagactgacccctgttgcaagagttgacaagatgtttgaa
cagattctagctaagcttccaggcgaacctcaattcattctttgtgtcttaccagagaaa
aaaaatagtgatatttatgggccttggaagaaacaaagtcttactgagtttgggattgcc
acacaatgcatttcccctactaagatcagtgatcagtaccttaccaatgtacttcttaag
ataaatactaagcttggaggaataaattctttgttggcaatagagcactcctcacgtgtt
cctctggtgaaggatactcctacaatgattttggggatggatgtctctcatgggtctcct
ggtcgatcagatattccttctgttgctgcagttgttagctctcgaagttggccacttatt
tcaaggtatagagcagctgttagaacacaatctcctaagatggagatgattgatgctcta
tacaaaccactggaaaatggaactgatgctggtattatcagggaactgcttgtggacttc
tataagacgagcaatggacgcaaaccaactcagattattgtcttcagggatggagtgagc
gagtcacaattcaatcaagtcttgaatatcgagctagaccaaatcataaaggcttaccag
cacctcggggaggttaacgttccaaagtttactttgattattgcacagaagaatcatcac
acaaagctatttcaacagggttccccagataatgttccagcagggacagttgtggacaca
gagattgtgcatccaaggaattacgatttctacatgtgtgctcaagcaggaatgatagga
acttcgaggccagcgcactatcatgtcttggttgatgagattggattttctcccgatgac
ttgcaaaacctcattcactccctttcttatgtgtaccagaggagtacaactgcaatctct
atcgtggcgcccatttgttatgcccaccttgctgcagcacaagtggggcagtttatgaag
tttgaggatctgtcagaaacgtcatcagggaaaggcagtgtcacttcatcagaaagcgtc
ccggttccagagctccctaagttgcatgagaacgtccagggctcaatgttcttctgctga

DBGET integrated database retrieval system