Malus domestica (apple): 103442756
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Entry
103442756 CDS
T03194
Name
(RefSeq) polygalacturonase At1g48100 isoform X2
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
mdm
Malus domestica (apple)
Pathway
mdm00040
Pentose and glucuronate interconversions
mdm01100
Metabolic pathways
Module
mdm_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
103442756
Enzymes [BR:
mdm01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
103442756
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GFIT
Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
End_N_terminal
Motif
Other DBs
NCBI-GeneID:
103442756
NCBI-ProteinID:
XP_028963565
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Position
09:join(1764594..1764887,1764995..1765126,1765206..1765403,1765691..1765735,1765819..1766026,1766227..1766417,1766506..1766901)
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AA seq
487 aa
AA seq
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MRTFNLKTLLFFVLIAFIISFSSFFEPCDAREGGNKQHWRKKQKGYGGDHRRAASRGDSY
ITTDETAVTLGKKSGGGSNVFNVLDYGAKGDGKADDTKAFEAAWAAACKVQASTISVPSG
SVFLVKPISFSGPNCEENIVFQLDGKIIAPTSSGDWGSGLLQWIEFTKLKGISIKGTGVI
DGQGSVWWNDSPKYNPANESTDSSLDDLATESYSGKMPSTKPTALRFYGSDLVSVTGITL
QNSPQAHLKFDACTNVQVSGISISSPGNSPNTDGIHLQNSQNAVISASSIACGDDCVSIQ
TGCSNVYIHNVNCGPGHGVSIGGLGKDNTKACVSNVTVRDVKMHSTLTGVRIKTWQGGSG
SVQNIMFSNIQLTEVETPIMIDQFYCDKSKCQNQSSAVAISGVNYVNIQGTYTSKAVHFA
CSDSSPCTGVSLDTIELKSVDEGKHLYDPFCWEAYGVLKTSTVPRIDCLKKGKASTKAQS
GSSGSSC
NT seq
1464 nt
NT seq
+upstream
nt +downstream
nt
atgaggacgtttaacctaaaaaccctcttgttctttgttctcattgcgtttattatctcg
ttttcgagttttttcgaaccgtgtgatgctcgagagggaggcaataagcagcactggagg
aagaaacaaaagggttatggtggtgatcatcgccgcgctgcgtcgaggggagacagttac
atcacaacggacgaaactgcggtgacacttggaaaaaagagcggcgggggttcgaacgtg
tttaatgtgttggactatggtgctaaaggtgatggaaaagctgatgacaccaaggcgttc
gaggcggcgtgggcagcagcttgcaaagtgcaggcatcaactataagtgttccttccggg
tctgtgttccttgtcaaaccaatctctttctctggccctaactgcgaagaaaatatcgtg
tttcagttagatggtaaaatcatagctccaacaagctcaggggattggggttcaggtctt
ttacaatggattgaattcacaaaactaaaagggatttcgatcaaaggcaccggagtcatt
gatggacaaggctcggtttggtggaatgactcgccgaaatacaatcctgcaaacgaatca
acggatagcagtctcgatgatttggccacagaaagttacagtgggaaaatgccaagcacc
aaaccaacggctcttaggttctatggaagcgacctcgttagtgtcactggcataacactt
caaaacagccctcaggcgcacctcaagttcgacgcctgcacaaatgttcaggtttccggt
ataagtatttcatccccgggcaacagccccaacacggatggaatccacctccaaaactcc
caaaatgctgtcatttccgccagcagtatcgcctgtggagatgactgtgtatcgatacaa
actggatgctcgaacgtatacatacacaacgtaaattgtggacctggacatggagtcagc
attggcgggctagggaaggacaacacgaaagcttgcgtttcgaacgtcactgtccgagac
gttaaaatgcacagtacactcacgggagtcagaataaagacctggcagggaggatcgggg
tctgtccaaaacataatgttctcaaacattcaactaacagaagttgaaaccccgatcatg
attgaccagttctactgcgacaagagcaagtgccaaaatcagagctccgctgtggcgatt
tcgggtgtgaattacgtaaacatacaaggaacctacacgtcgaaggccgtgcatttcgca
tgcagtgacagctctccgtgcactggtgtgtctctggataccatagagttgaaatcagtt
gacgaagggaagcacctgtacgaccctttctgttgggaggcgtacggagtgctcaaaaca
agcaccgttcctcgaatcgactgcttgaagaaggggaaggcgagcacaaaagctcaatcc
ggaagtagcggttcttcttgctaa
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