Malus domestica (apple): 103443672
Help
Entry
103443672 CDS
T03194
Name
(RefSeq) sm-like protein LSM1B isoform X2
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
mdm
Malus domestica (apple)
Pathway
mdm03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mdm00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103443672
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mdm03019
]
103443672
Messenger RNA biogenesis [BR:
mdm03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103443672
mRNA degradation factors
5'-3' decay
Lsm complex
103443672
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Hfq
Motif
Other DBs
NCBI-GeneID:
103443672
NCBI-ProteinID:
XP_008380788
LinkDB
All DBs
Position
09:complement(join(14856749..14856826,14857757..14857819,14857906..14858021,14858112..14858180,14858583..14858643))
Genome browser
AA seq
128 aa
AA seq
DB search
MSWAGPEDVYLSTSLASYLDKKLLVLLRDGRKLLGILRSFDQFANAVLEGACERVIVGDL
YCDIPLGLYVIRGENVVLIGELDSEREELPPHMTRVSAAEIKRAQKAEREASDLKGTMRK
RMEFLDMD
NT seq
387 nt
NT seq
+upstream
nt +downstream
nt
atgtcttgggcaggcccagaagatgtctacctttccacttctcttgctagctaccttgac
aagaagcttcttgtgctgctccgtgatggtcgaaaacttttggggatacttcggtctttt
gatcaattcgccaatgccgttctcgagggtgcatgtgagagagtcattgttggggatctt
tactgtgacatccccttgggtctttacgtcatccgtggggagaatgttgttctaattggc
gagctggattcagaaagggaggaacttccaccacacatgactcgcgtttcagctgcagaa
attaaaagggcacagaaagcagaaagagaagcttctgatcttaaaggtacaatgagaaaa
agaatggagttcctggatatggattaa
DBGET
integrated database retrieval system
